[Neurodebian-users] fsl ubuntu installation problem

[Yaroslav Halchenko]

it feels like that there is possibly some confusion in priorities among
repositories.  Would you mind sharing output of

apt-cache policy
apt-cache policy fsl fsl-complete fsl-core

?

also, what if you just  dpkg --purge fsl and then try install -complete?

PS I have tried installing/upgrading actually under a clean 12.04 --
went just fine.  I have:

# apt-cache policy fsl fsl-complete fsl-core
fsl:
  Installed: 5.0.7-4~nd12.04+1
  Candidate: 5.0.7-4~nd12.04+1
  Version table:
 *** 5.0.7-4~nd12.04+1 0
        500 http://neuro.debian.net/debian/ precise/non-free amd64 Packages
        100 /var/lib/dpkg/status
     4.1.8-1ubuntu1 0
        500 http://archive.ubuntu.com/ubuntu/ precise/multiverse amd64 Packages
fsl-complete:
  Installed: 5.0.7-1~nd12.04+1
  Candidate: 5.0.7-1~nd12.04+1
  Version table:
 *** 5.0.7-1~nd12.04+1 0
        500 http://neuro.debian.net/debian/ precise/contrib amd64 Packages
        100 /var/lib/dpkg/status
fsl-core:
  Installed: 5.0.7-4~nd12.04+1
  Candidate: 5.0.7-4~nd12.04+1
  Version table:
 *** 5.0.7-4~nd12.04+1 0
        500 http://neuro.debian.net/debian/ precise/non-free amd64 Packages
        100 /var/lib/dpkg/status


On Thu, 07 Aug 2014, mahsaabadian at sbmu.ac.ir wrote:

>    Dear neurodebian experts;

>    I am trying to install  FSL 5 on ubuntu 12.4 but I have faced problem I
>    did step by step according to FSL installation manual

>    1. added neurodebian  repository

>    2.sudo apt-get update

>    3. sudo apt-install fsl – complete ?( I even try sudo apt-get install fsl
>    fsl-complete) and ($ sudo apt-get install fsl fsl-doc fslview fslview-doc
>    fsl-atlases fsl-possum-data fsl-first-data fsl-feeds dicomnifti
>    libvtk5-dev vtk-examples vtk-doc)

>     

>    But I still can not install it correctly .

>     

>    mahsa at mahsa-TA870:~$ sudo apt-get install fsl fsl-complete

>    [sudo] password for mahsa:

>    Reading package lists... Done

>    Building dependency tree      

>    Reading state information... Done

>    fsl-complete is already the newest version.

>    The following packages will be upgraded:

>      fsl

>    1 upgraded, 0 newly installed, 0 to remove and 675 not upgraded.

>    1 not fully installed or removed.

>    Need to get 0 B/21.5 kB of archives.

>    After this operation, 26.6 kB disk space will be freed.

>    Do you want to continue [Y/n]? y

>    dpkg: dependency problems prevent configuration of fsl:

>     fsl-core (5.0.7-4~nd12.04+1) breaks fsl (<< 5.0.3) and is installed.

>      Version of fsl to be configured is 4.1.8-1ubuntu1.

>    dpkg: error processing fsl (--configure):

>     dependency problems - leaving unconfigured

>    No apport report written because MaxReports is reached already

>                                                                  Errors were
>    encountered while processing:

>     fsl

>    E: Sub-process /usr/bin/dpkg returned an error code (1)

>    mahsa at mahsa-TA870:~$

>     

>    I would really appreciate if anybody could help me.

-- 
Yaroslav O. Halchenko, Ph.D.
http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org
Research Scientist,            Psychological and Brain Sciences Dept.
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
WWW:   http://www.linkedin.com/in/yarik