[Neurodebian-users] Problem with atlasquery?

[Michael Hanke]

Hi,

[re-adding neurodebian-users to CC]

On Thu, Jul 24, 2014 at 04:26:16PM +0100, Jonathan Brooks wrote:
> Of course, please see attached.
> 
> If I just run atlasquery directly i.e. not called by autoaq.sh, then I get the same error:
> 
> $FSLDIR/bin/atlasquery -a "Harvard-Oxford Cortical Structural Atlas" -m thresh_zstat1 >> foo.txt
> 
> *** Error in `/usr/share/fsl/5.0/bin/atlasquery': corrupted double-linked list: 0x0000000000a5c9f0 ***
> Aborted (core dumped)

It is working properly with your provided file on my Debian jessie
laptop. I am using FSL 5.0.7-4 and atlasquery from fslview 
4.0.1-2~nd80+1.

What happens if you run:

atlasquery -a "Harvard-Oxford Cortical Structural Atlas" -m thresh_zstat1 >> foo.txt

(no FSLDIR prefix)

?

Michael



-- 
Michael Hanke
http://mih.voxindeserto.de