[Neurodebian-users] SienaX doesn't accept options

[Lorenzo Bandieri]

2015-02-27 21:19 GMT+01:00 Lorenzo Bandieri <lorenzo.bandieri at gmail.com>:
> Hi list,
>
> I'm using FSL 5.0. I'm trying to pass SienaX (fsl5.0-sienax) an
> option; according to the documentation[1], it should be possible to
> pass the optional parameter -B to change the BET defaults, e.g
>
> fsl5.0-sienax foo_bar -B "-f 0.3"
>
> In my case, every attempt to pass a value with the -B option has been
> unsuccessful.


To follow up on this, I asked on the FSL mailing list. Turns out that
it is likely a bug on the wrapper script, since running plain "sienax"
works correctly (at least, on some test MRs). If that's ok, I'm going
to go ahead and open a bug report on fsl-5.0-complete.