[Neurodebian-users] Docker and neurodeb

Yaroslav Halchenko debian at onerussian.com
Mon Apr 18 14:47:19 UTC 2016


On Mon, 18 Apr 2016, Yaroslav Halchenko wrote:

> >    I wanted to know if anybody has been successful using docker's image of
> >    Neurodebian. If so could you please provide me with some clues as to how I
> >    might access the afni and fsl capabilities from an initial run? Thank you,
> >    I'm sure this is easier than I'm making it.

> We build dockers on top of 'standard' debian and ubuntu images which
> come without contrib/non-free suites, so you would need to have them
> made available:

> $> docker run -it --rm=true neurodebian:stretch                 

> root at 015141680ff8:/# cat /etc/apt/sources.list.d/neurodebian.sources.list 
> deb http://neuro.debian.net/debian stretch main
> deb http://neuro.debian.net/debian data main
> #deb-src http://neuro.debian.net/debian-devel stretch main

> root at 015141680ff8:/# sed -i -e 's,main$,main contrib non-free,g' /etc/apt/sources.list.d/neurodebian.sources.list

ah -- and do the same for the main sources.list 


-- 
Yaroslav O. Halchenko
Center for Open Neuroscience     http://centerforopenneuroscience.org
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
WWW:   http://www.linkedin.com/in/yarik        



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