[pymvpa] Mac OS X Installer issues

James Kyle jameskyle at ucla.edu
Wed Jan 14 19:32:37 UTC 2009


My mistake, the port name is:

py25-pymvpa,

This would make the correct command

> $ sudo port install py25-pymvpa +scipy +pynifti +hcluster +libsvm

My apologies for the inconvenience. You can also search for partial  
matches of ports via:

> port search pymvpa

-james
On Jan 14, 2009, at 11:15 AM, James M. Hughes wrote:

> So I added this repository to MacPorts and tried the install command
> you gave in this email, but it doesn't work -- it says "Port pymvpa
> not found" -- any thoughts?
>
> Thanks,
> James.
> On Jan 13, 2009, at 2:02 PM, James Kyle wrote:
>
>>> Sorry, but I have no idea. The installer has many problems in terms
>>> of
>>> dependencies to a specific Python version, that could be the cause
>>> -- or
>>> some unknown change in Enthought's Python.
>>>
>>> Fortunately, we will be able to discontinue the installer and
>>> replace it
>>> with a proper MacPort (thanks to James Kyle). This will also make
>>> it a
>>> lot easier to install the numerous dependencies of PyMVPA on a Mac
>>> system.
>>>
>>> You can take a look at the docs of the upcoming version 0.4.1 to see
>>> how
>>> it is going to work. We only need a few more days for testing and
>>> will
>>> release 0.4.1 when nothing pops up -- that should solve this problem
>>> properly.
>>>
>>> http://git.debian.org/?p=pkg-exppsy/pymvpa.git;a=commitdiff;h=b780ccdd3a1ee277b3c3876e433cda0ed57eaf3b
>>>
>>
>> I've created a personal repository for the adventurous. Please note,
>> this is my development repository for various ports I work on besides
>> the ones associated with pymvpa. So there are no guarantees of
>> consistency from day to day.
>>
>> However, I've just installed pymvpa on my laptop using it, so the
>> pymvpa ones are fine to get you up and running until they are added  
>> to
>> the main repository.
>>
>> To use it, go by the same instructions found in the 0.4.1 Michael
>> mentions above for installing MacPorts.
>>
>> Once done, do the following to use my repository:
>>
>> 1. edit the file /opt/local/etc/macports/sources.conf
>> 2. Add the following line *after* the default one (rsync://
>> rsync.macports.org/release/ports/ [default])
>>> rsync://www.ccn.ucla.edu/release/ports/
>>
>> Your /opt/local/etc/macports/sources.conf file should now look
>> something like:
>>> # To get the ports tree from the MacPorts rsync.macports.org server
>>> use:
>>> rsync://rsync.macports.org/release/ports/ [default]
>>> rsync://www.ccn.ucla.edu/release/ports/
>>
>> Then do the following:
>>
>> $ sudo port sync
>> $ sudo port install pymvpa +scipy +pynifti +hcluster +libsvm
>> +pywavelet
>>
>> That should get you going. If this is your first time using  
>> MacPorts &
>> python 2.5, it will install this for you. But an additional step is
>> needed:
>>
>> $ sudo port install python_select
>> $ sudo python_select python25
>>
>> MacPorts has the ability of installing several python versions at a
>> time, the python_select utility ensures that the default python (/ 
>> opt/
>> local/bin/python) points to your preferred version.
>>
>> Hope this helps,
>>
>> James Kyle
>>
>> _______________________________________________
>> Pkg-ExpPsy-PyMVPA mailing list
>> Pkg-ExpPsy-PyMVPA at lists.alioth.debian.org
>> http://lists.alioth.debian.org/mailman/listinfo/pkg-exppsy-pymvpa
>
>
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