[pymvpa] PyMVPA searchlight command is freezing up

Yaroslav Halchenko debian at onerussian.com
Wed Oct 24 15:40:38 UTC 2012

On Wed, 24 Oct 2012, Sarah Helfinstein wrote:

>    Sorry, I'm not exactly sure what you mean. Are you saying you were able to
>    run the script successfully with my data and got output? 


> Or were you
>    unable to load my data and that's why you couldn't reproduce the error? 

I loaded data just fine

> If
>    the former, then we'll just try to run it using the same set-up you used &
>    maybe that will work for us. Also, I didn't receive the attachment you
>    sent. I only receive your responses through the mailing list e-mails...I'm
>    not sure if I'm supposed to be getting them another way, as well.

hm... it was attached to my email from
Date: Tue, 23 Oct 2012 17:41:53 -0400
otherwise (may be your university filtered them out) -- fetch it online
although it is exactly your script with only loading data from the
stored dataset instead of creating a new one

what was of interest to me was:
- version of libsvm
- output of mvpa2.wtf(), so we could see details of the system you are
  using, possibly to replicate in a similar setup

Yaroslav O. Halchenko
Postdoctoral Fellow,   Department of Psychological and Brain Sciences
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
WWW:   http://www.linkedin.com/in/yarik        

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