[pymvpa] External module 'glmnet' not found in iPython notebook

Nick Oosterhof n.n.oosterhof at googlemail.com
Wed Jun 22 08:39:52 UTC 2016


> On 21 Jun 2016, at 23:04, Michael Kranz <mbkranz at gmail.com> wrote:
> 
> I'm having trouble loading the mvpa2.clfs.glmnet classifier module in iPython notebook. 
> 
> It doesn't appear to be a problem with my sys.path as I have tried adding various paths to sys.path (which solved the problem for other undetected modules in iPython such as nibabel).
> 
> Is it something specific with the connection with R and/or rpy2 module (as glmnet is from R)? How should I proceed to solve this problem?

In general, providing the commands that you tried, the output, and what you think is wrong/unexpected would be helpful.

Also please provide the output of:

    from mvpa2.suite import wtf
    wtf()


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