[pymvpa] trouble importing mvpa2.suite

Yaroslav Halchenko debian at onerussian.com
Wed Sep 13 14:17:16 UTC 2017


big summary -- system and installation(s) on it quite old

1. easiest resolution(s):

  remove or disable sklearn 

  remove: depends on how was installed, could be   dpkg --purge
  python-sklearn
  
  disable:   export MVPA_EXTERNALS_HAVE_SKL=no

  if you don't use it for your current analysis

2. updates:


> PyMVPA:
>  Version:       2.1.0

even on wheezy which you seems to use we have a backport of 2.6.0
release avail from neurodebian:

http://neuro.debian.net/pkgs/python-mvpa2.html

>  OS:            posix Linux 3.2.0-4-amd64 #1 SMP Debian 3.2.89-2
>  Distribution:  debian/7.11

>   skl         : 0.16.1

unfortunately for wheezy we do not have newer backport.  altogether you
might benefit from upgrading from oldoldstable of Debian which you are
using ATM

>   PYTHONPATH          :
> ":/usr/lib/python2.7/lib-old:/usr/local/lib/python2.7/dist-packages:/data:/usr/lib/python2.7/lib-dynload:/usr/lib/python2.7/plat-linux2:/usr/lib/python2.7/dist-packages/gtk-2.0:/usr/lib/python2.7/dist-packages:/usr/lib/pymodules/python2.7:/usr/lib/python2.7/dist-packages/IPython/extensions:/usr/lib/python2.7:/usr/lib/python2.7/dist-packages/wx-2.8-gtk2-unicode:/usr/lib/python2.7/lib-tk:/usr/lib/python2.7/dist-packages/PIL"

there is some danger in the paths!  e.g. you could shot
yourself in the foot (e.g. having some module under /data

-- 
Yaroslav O. Halchenko
Center for Open Neuroscience     http://centerforopenneuroscience.org
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
WWW:   http://www.linkedin.com/in/yarik        



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