[pymvpa] trouble importing mvpa2.suite

Yaroslav Halchenko debian at onerussian.com
Wed Sep 13 18:01:37 UTC 2017


On Wed, 13 Sep 2017, Anna Manelis wrote:

>    Thank you very much! I think it works.

>    I ran in terminal:

>    sudo dpkg --purge python-scikits-learn
>    sudo dpkg --purge python-sklearn
>    export MVPA_EXTERNALS_HAVE_SKL=no
>    sudo apt-get install python-mvpa2
>    sudo apt-get autoremove python-sklearn-lib

>    python
>    Python 2.7.3 (default, Jun 21 2016, 18:38:19)
>    [GCC 4.7.2] on linux2
>    Type "help", "copyright", "credits" or "license" for more information.
>    >>> from mvpa2.tutorial_suite import *
>    /usr/lib/python2.7/dist-packages/nose/util.py:14: DeprecationWarning: The
>    compiler package is deprecated and removed in Python 3.x.
>      from compiler.consts import CO_GENERATOR

>    Should I just disregard this DeprecationWarning?

yes

>    I am afraid to upgrade Debian from wheezy - who knows what's gonna happen

;) 

you could learn also to use singularity... we have it in neurodebian
apt-get install singularity-container
singularity pull shub://neurodebian/neurodebian
./neurodebian-neurodebian-master.img

and you are in a fresh neurodebian ... let me know how it goes

-- 
Yaroslav O. Halchenko
Center for Open Neuroscience     http://centerforopenneuroscience.org
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
WWW:   http://www.linkedin.com/in/yarik        
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