[pymvpa] trouble importing mvpa2.suite

Anna Manelis anna.manelis at gmail.com
Sun Sep 17 21:34:06 UTC 2017


My computer is already configured to use NeuroDebian repository, so I hoped
to be able to install singularity-container. This is not the case

E: Unable to locate package singularity-container

I did not have problem installing other packages from NeuroDebian though.

On Sun, Sep 17, 2017 at 5:23 PM, Yaroslav Halchenko <yoh at onerussian.com>
wrote:

> In NeuroDebian yes
> http://neuro.debian.net/pkgs/singularity-container.html?
> highlight=singularity
>
>
> On September 17, 2017 4:10:59 PM EDT, Anna Manelis <anna.manelis at gmail.com>
> wrote:
>>
>>
>> I tried to install singularity container
>>
>> sudo apt-get install singularity-container
>>
>> But it failed to install with the error:
>>
>> E: Unable to locate package singularity-container
>>
>> Is singularity-container actually available for good old wheezy?
>>
>> Thank you,
>> Anna.
>>
>>
>>
>> On Wed, Sep 13, 2017 at 2:01 PM, Yaroslav Halchenko <
>> debian at onerussian.com> wrote:
>>
>>>
>>> On Wed, 13 Sep 2017, Anna Manelis wrote:
>>>
>>> >    Thank you very much! I think it works.
>>>
>>> >    I ran in terminal:
>>>
>>> >    sudo dpkg --purge python-scikits-learn
>>> >    sudo dpkg --purge python-sklearn
>>> >    export MVPA_EXTERNALS_HAVE_SKL=no
>>> >    sudo apt-get install python-mvpa2
>>> >    sudo apt-get autoremove python-sklearn-lib
>>>
>>> >    python
>>> >    Python 2.7.3 (default, Jun 21 2016, 18:38:19)
>>> >    [GCC 4.7.2] on linux2
>>> >    Type "help", "copyright", "credits" or "license" for more
>>> information.
>>> >    >>> from mvpa2.tutorial_suite import *
>>> >    /usr/lib/python2.7/dist-packages/nose/util.py:14:
>>> DeprecationWarning: The
>>> >    compiler package is deprecated and removed in Python 3.x.
>>> >    Â  from compiler.consts import CO_GENERATOR
>>>
>>> >    Should I just disregard this DeprecationWarning?
>>>
>>> yes
>>>
>>> >    I am afraid to upgrade Debian from wheezy - who knows what's gonna
>>> happen
>>>
>>> ;)
>>>
>>> you could learn also to use singularity... we have it in neurodebian
>>> apt-get install singularity-container
>>> singularity pull shub://neurodebian/neurodebian
>>> ./neurodebian-neurodebian-master.img
>>>
>>> and you are in a fresh neurodebian ... let me know how it goes
>>>
>>> --
>>> Yaroslav O. Halchenko
>>> Center for Open Neuroscience     http://centerforopenneuroscience.org
>>> Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
>>> Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
>>> WWW:   http://www.linkedin.com/in/yarik
>>>
>>> _______________________________________________
>>> Pkg-ExpPsy-PyMVPA mailing list
>>> Pkg-ExpPsy-PyMVPA at lists.alioth.debian.org
>>> http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-
>>> exppsy-pymvpa
>>>
>>
>>
> --
> Sent from a phone which beats iPhone.
>
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