[pymvpa] trouble importing mvpa2.suite

Anna Manelis anna.manelis at gmail.com
Mon Sep 18 13:23:42 UTC 2017


Yes. I did apt-get update a week ago and today's morning. The result is
still the same :(

On Mon, Sep 18, 2017 at 12:29 AM, Yaroslav Halchenko <yoh at onerussian.com>
wrote:

> Just to make sure, did you do
> apt-get update
> Any time recently?
>
>
> On September 17, 2017 5:34:06 PM EDT, Anna Manelis <anna.manelis at gmail.com>
> wrote:
>>
>> My computer is already configured to use NeuroDebian repository, so I
>> hoped to be able to install singularity-container. This is not the case
>>
>> E: Unable to locate package singularity-container
>>
>> I did not have problem installing other packages from NeuroDebian though.
>>
>> On Sun, Sep 17, 2017 at 5:23 PM, Yaroslav Halchenko <yoh at onerussian.com>
>> wrote:
>>
>>> In NeuroDebian yes
>>> http://neuro.debian.net/pkgs/singularity-container.html?high
>>> light=singularity
>>>
>>>
>>> On September 17, 2017 4:10:59 PM EDT, Anna Manelis <
>>> anna.manelis at gmail.com> wrote:
>>>>
>>>>
>>>> I tried to install singularity container
>>>>
>>>> sudo apt-get install singularity-container
>>>>
>>>> But it failed to install with the error:
>>>>
>>>> E: Unable to locate package singularity-container
>>>>
>>>> Is singularity-container actually available for good old wheezy?
>>>>
>>>> Thank you,
>>>> Anna.
>>>>
>>>>
>>>>
>>>> On Wed, Sep 13, 2017 at 2:01 PM, Yaroslav Halchenko <
>>>> debian at onerussian.com> wrote:
>>>>
>>>>>
>>>>> On Wed, 13 Sep 2017, Anna Manelis wrote:
>>>>>
>>>>> >    Thank you very much! I think it works.
>>>>>
>>>>> >    I ran in terminal:
>>>>>
>>>>> >    sudo dpkg --purge python-scikits-learn
>>>>> >    sudo dpkg --purge python-sklearn
>>>>> >    export MVPA_EXTERNALS_HAVE_SKL=no
>>>>> >    sudo apt-get install python-mvpa2
>>>>> >    sudo apt-get autoremove python-sklearn-lib
>>>>>
>>>>> >    python
>>>>> >    Python 2.7.3 (default, Jun 21 2016, 18:38:19)
>>>>> >    [GCC 4.7.2] on linux2
>>>>> >    Type "help", "copyright", "credits" or "license" for more
>>>>> information.
>>>>> >    >>> from mvpa2.tutorial_suite import *
>>>>> >    /usr/lib/python2.7/dist-packages/nose/util.py:14:
>>>>> DeprecationWarning: The
>>>>> >    compiler package is deprecated and removed in Python 3.x.
>>>>> >    Â  from compiler.consts import CO_GENERATOR
>>>>>
>>>>> >    Should I just disregard this DeprecationWarning?
>>>>>
>>>>> yes
>>>>>
>>>>> >    I am afraid to upgrade Debian from wheezy - who knows what's
>>>>> gonna happen
>>>>>
>>>>> ;)
>>>>>
>>>>> you could learn also to use singularity... we have it in neurodebian
>>>>> apt-get install singularity-container
>>>>> singularity pull shub://neurodebian/neurodebian
>>>>> ./neurodebian-neurodebian-master.img
>>>>>
>>>>> and you are in a fresh neurodebian ... let me know how it goes
>>>>>
>>>>> --
>>>>> Yaroslav O. Halchenko
>>>>> Center for Open Neuroscience     http://centerforopenneuroscience.org
>>>>> Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
>>>>> Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
>>>>> WWW:   http://www.linkedin.com/in/yarik
>>>>>
>>>>> _______________________________________________
>>>>> Pkg-ExpPsy-PyMVPA mailing list
>>>>> Pkg-ExpPsy-PyMVPA at lists.alioth.debian.org
>>>>> http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-
>>>>> exppsy-pymvpa
>>>>>
>>>>
>>>>
>>> --
>>> Sent from a phone which beats iPhone.
>>>
>>
>>
> --
> Sent from a phone which beats iPhone.
>
> _______________________________________________
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