Bug#744476: nco: run dh-autoreconf to update config.{sub, guess} and {libtool, aclocal}.m4

[Matthias Klose]

Package: src:nco
Version: 4.0.9-1
User: debian-devel at lists.debian.org
Usertags: autoreconf

The package fails to build on arm64 (aarch64-linux-gnu), because the
config.{guess,sub} files are out of date, and are not updated during
the build.  If possible, please do not update these files directly,
but build-depend on autotools-dev instead, and use the tools provided
by autotools-dev to update these files.

  - For dh, call dh --with autoreconf.

  - For cdbs based build systems, include
    /usr/share/cdbs/1/rules/autoreconf.mk

  - For other rules files, call dh_autoreconf before calling
    configure (in the build or configure target), and call
    dh_autoreconf_clean before dh_clean in the clean target.

For combining autoreconf and autotools_dev, see bug #698765.

After the build on any architecture, and before a clean, a grep for
aarch64 in the config.sub file(s) should print some lines.

The full build log can be found at:
http://people.debian.org/~doko/logs/arm64-20140414/buildlog_ubuntu-trusty-arm64.nco_4.0.9-1build1_FAILEDTOBUILD.txt
The last lines of the build log are at the end of this report.

Please note that these builds were done in an Ubuntu development,
environment there may be a few false positives in these bug reports.

See https://wiki.debian.org/qa.debian.org/FTBFS for a guide how to
address these.

[...]
Adding debian:TURKTRUST_Certificate_Services_Provider_Root_1.pem
Adding debian:Buypass_Class_3_CA_1.pem
Adding debian:Thawte_Premium_Server_CA.pem
Adding debian:DigiCert_Global_Root_CA.pem
done.
Processing triggers for libc-bin (2.19-0ubuntu3) ...
Processing triggers for ca-certificates (20130906ubuntu2) ...
Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d....
done.
done.
Checking correctness of source dependencies...
Toolchain package versions: libc6-dev_2.19-0ubuntu3 make_3.81-8.2ubuntu3 dpkg-dev_1.17.5ubuntu5 gcc-4.8_4.8.2-17ubuntu1x1 g++-4.8_4.8.2-17ubuntu1x1 binutils_2.24-5ubuntu1 libstdc++-4.8-dev_4.8.2-17ubuntu1x1 libstdc++6_4.8.2-17ubuntu1x1
------------------------------------------------------------------------------
dpkg-source: warning: -sn is not a valid option for Dpkg::Source::Package::V3::Quilt
gpgv: Signature made Sat Jun  2 13:45:01 2012 UTC using RSA key ID B913E271
gpgv: Can't check signature: public key not found
dpkg-source: warning: failed to verify signature on ./nco_4.0.9-1build1.dsc
dpkg-source: info: extracting nco in nco-4.0.9
dpkg-source: info: unpacking nco_4.0.9.orig.tar.gz
dpkg-source: info: unpacking nco_4.0.9-1build1.debian.tar.gz
dpkg-buildpackage: source package nco
dpkg-buildpackage: source version 4.0.9-1build1
dpkg-buildpackage: source distribution quantal
 dpkg-source --before-build nco-4.0.9
dpkg-buildpackage: host architecture arm64
 /usr/bin/fakeroot debian/rules clean
dh_testdir
dh_testroot
rm -f build-arch-stamp build-indep-stamp config-stamp
[ ! -f Makefile ] || /usr/bin/make distclean
rm -f data/big.nc
dh_clean
 debian/rules build-arch
dh_testdir
LD_LIBRARY_PATH='' LDFLAGS='' NETCDF_INC='/usr/include' NETCDF_LIB='/usr/lib' NETCDF_ROOT='/usr' NETCDF4_ROOT='/usr' \
	./configure --build=aarch64-linux-gnu --enable-dap-netcdf --enable-netcdf4 --enable-udunits2 \
		--prefix=/usr \
		--infodir=/usr/share/info \
		--libdir=/usr/lib/nco \
		--mandir=/usr/share/man \
		--enable-gsl \
		--enable-ncap2 \
		--disable-nco_cplusplus \
		--disable-udunits \
		--disable-static
checking build system type... Invalid configuration `aarch64-linux-gnu': machine `aarch64' not recognized
configure: error: /bin/bash autobld/config.sub aarch64-linux-gnu failed
make: *** [config.status] Error 1
dpkg-buildpackage: error: debian/rules build-arch gave error exit status 2