Bug#934875: libhdf5-openmpi-dev: pkg-config cflags give wrong mpi include paths

Drew Parsons dparsons at debian.org
Fri Aug 16 05:34:56 BST 2019


Package: libhdf5-openmpi-dev
Version: 1.10.4+repack-10
Severity: normal

hdf5-openmpi.pc provides CFLAGS for hdf5 as 
  -I/usr/include/openmpi -I/usr/include/hdf5/openmpi

But /usr/include/openmpi is the wrong path. MPI header files are
multiarch, so in 
  -I/usr/lib/x86_64-linux-gnu/openmpi/include  -I/usr/lib/x86_64-linux-gnu/openmpi/include/openmpi
(for amd64).

The same applies to hdf5-mpich.


-- System Information:
Debian Release: bullseye/sid
  APT prefers unstable
  APT policy: (500, 'unstable'), (1, 'experimental')
Architecture: amd64 (x86_64)
Foreign Architectures: i386

Kernel: Linux 4.19.0-5-amd64 (SMP w/4 CPU cores)
Kernel taint flags: TAINT_WARN, TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE
Locale: LANG=en_AU.UTF-8, LC_CTYPE=en_AU.UTF-8 (charmap=UTF-8), LANGUAGE=en_AU.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
LSM: AppArmor: enabled

Versions of packages libhdf5-openmpi-dev depends on:
ii  libaec-dev                         1.0.4-1
ii  libhdf5-openmpi-103                1.10.4+repack-10
ii  libjpeg-dev                        1:1.5.2-2
ii  libjpeg62-turbo-dev [libjpeg-dev]  1:1.5.2-2+b1
ii  libopenmpi-dev                     3.1.3-11
ii  zlib1g-dev                         1:1.2.11.dfsg-1+b1

libhdf5-openmpi-dev recommends no packages.

Versions of packages libhdf5-openmpi-dev suggests:
ii  libhdf5-doc  1.10.4+repack-10

-- no debconf information



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