[Pkg-gridengine-devel] Bug#701446: gridengine: ftbfs with eglibc-2.17

[Matthias Klose]

Package: src:gridengine
Version: 6.2u5-7.1
Severity: important
Tags: sid jessie
User: debian-glibc at lists.debian.org
Usertags: ftbfs-glibc-2.17

The package fails to build in a test rebuild on at least amd64 with
eglibc-2.17, but succeeds to build with eglibc-2.13. The
severity of this report may be raised before the jessie release.

The test rebuild was done together with GCC-4.8, so some issues
might be caused by the updated GCC as well.

  ../3rdparty/jemalloc/jemalloc.c:6359:8: error: conflicting type qualifiers for '__malloc_initialize_hook'

The full build log can be found at:
http://people.debian.org/~doko/logs-20130217/gcc48/gridengine_6.2u5-7.1_unstable_gcc48.log
The last lines of the build log are at the end of this report.

To install eglibc from experimental,

  apt-get -t experimental install libc6-dev

To build with GCC 4.8, either set CC=gcc-4.8 CXX=g++-4.8 explicitly,
or install the gcc, g++, gfortran, ... packages from experimental.

  apt-get -t experimental install g++ g++-4.7 g++-4.8 libc6-dev


[...]
../3rdparty/jemalloc/jemalloc.c:2695:20: warning: 'arena_chunk_tree_s_RB_NEXT' defined but not used [-Wunused-function]
 RB_GENERATE_STATIC(arena_chunk_tree_s, arena_chunk_s, link, arena_chunk_comp)
                    ^
../3rdparty/jemalloc/tree.h:664:1: note: in definition of macro 'RB_GENERATE_INTERNAL'
 name##_RB_NEXT(struct type *elm)     \
 ^
../3rdparty/jemalloc/jemalloc.c:2695:1: note: in expansion of macro 'RB_GENERATE_STATIC'
 RB_GENERATE_STATIC(arena_chunk_tree_s, arena_chunk_s, link, arena_chunk_comp)
 ^
../3rdparty/jemalloc/jemalloc.c:2710:20: warning: 'arena_run_tree_s_RB_FIND' defined but not used [-Wunused-function]
 RB_GENERATE_STATIC(arena_run_tree_s, arena_run_s, link, arena_run_comp)
                    ^
../3rdparty/jemalloc/tree.h:625:1: note: in definition of macro 'RB_GENERATE_INTERNAL'
 name##_RB_FIND(struct name *head, struct type *elm)   \
 ^
../3rdparty/jemalloc/jemalloc.c:2710:1: note: in expansion of macro 'RB_GENERATE_STATIC'
 RB_GENERATE_STATIC(arena_run_tree_s, arena_run_s, link, arena_run_comp)
 ^
../3rdparty/jemalloc/jemalloc.c:2710:20: warning: 'arena_run_tree_s_RB_NFIND' defined but not used [-Wunused-function]
 RB_GENERATE_STATIC(arena_run_tree_s, arena_run_s, link, arena_run_comp)
                    ^
../3rdparty/jemalloc/tree.h:643:1: note: in definition of macro 'RB_GENERATE_INTERNAL'
 name##_RB_NFIND(struct name *head, struct type *elm)   \
 ^
../3rdparty/jemalloc/jemalloc.c:2710:1: note: in expansion of macro 'RB_GENERATE_STATIC'
 RB_GENERATE_STATIC(arena_run_tree_s, arena_run_s, link, arena_run_comp)
 ^
../3rdparty/jemalloc/jemalloc.c:2710:20: warning: 'arena_run_tree_s_RB_NEXT' defined but not used [-Wunused-function]
 RB_GENERATE_STATIC(arena_run_tree_s, arena_run_s, link, arena_run_comp)
                    ^
../3rdparty/jemalloc/tree.h:664:1: note: in definition of macro 'RB_GENERATE_INTERNAL'
 name##_RB_NEXT(struct type *elm)     \
 ^
../3rdparty/jemalloc/jemalloc.c:2710:1: note: in expansion of macro 'RB_GENERATE_STATIC'
 RB_GENERATE_STATIC(arena_run_tree_s, arena_run_s, link, arena_run_comp)
 ^
../3rdparty/jemalloc/jemalloc.c:2710:20: warning: 'arena_run_tree_s_RB_PREV' defined but not used [-Wunused-function]
 RB_GENERATE_STATIC(arena_run_tree_s, arena_run_s, link, arena_run_comp)
                    ^
../3rdparty/jemalloc/tree.h:686:1: note: in definition of macro 'RB_GENERATE_INTERNAL'
 name##_RB_PREV(struct type *elm)     \
 ^
../3rdparty/jemalloc/jemalloc.c:2710:1: note: in expansion of macro 'RB_GENERATE_STATIC'
 RB_GENERATE_STATIC(arena_run_tree_s, arena_run_s, link, arena_run_comp)
 ^
make[1]: *** [jemalloc.o] Error 1
make[1]: Leaving directory `/«PKGBUILDDIR»/source/LINUXAMD64_26'
make: *** [build-stamp] Error 1
not done
dpkg-buildpackage: error: debian/rules build gave error exit status 2