[Python-modules-team] Bug#829481: python-bioblend: FTBFS: make[2]: sphinx-build: Command not found
Chris Lamb
lamby at debian.org
Sun Jul 3 17:44:03 UTC 2016
Source: python-bioblend
Version: 0.7.0-1
Severity: serious
Justification: fails to build from source
User: reproducible-builds at lists.alioth.debian.org
Usertags: ftbfs
X-Debbugs-Cc: reproducible-builds at lists.alioth.debian.org
Dear Maintainer,
python-bioblend fails to build from source in unstable/amd64:
[..]
Get:17 http://httpredir.debian.org/debian sid/main amd64 python-requests-toolbelt all 0.6.0-2 [33.9 kB]
Get:18 http://httpredir.debian.org/debian sid/main amd64 python3-requests-toolbelt all 0.6.0-2 [34.1 kB]
Fetched 3356 kB in 0s (49.3 MB/s)
Selecting previously unselected package python-all.
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(Reading database ... 23085 files and directories currently installed.)
Preparing to unpack .../python-all_2.7.11-2_amd64.deb ...
Unpacking python-all (2.7.11-2) ...
Selecting previously unselected package python3-all.
Preparing to unpack .../python3-all_3.5.1-4_amd64.deb ...
Unpacking python3-all (3.5.1-4) ...
Selecting previously unselected package python-setuptools.
Preparing to unpack .../python-setuptools_20.10.1-1.1_all.deb ...
Unpacking python-setuptools (20.10.1-1.1) ...
Selecting previously unselected package python3-pkg-resources.
Preparing to unpack .../python3-pkg-resources_20.10.1-1.1_all.deb ...
Unpacking python3-pkg-resources (20.10.1-1.1) ...
Selecting previously unselected package python3-setuptools.
Preparing to unpack .../python3-setuptools_20.10.1-1.1_all.deb ...
Unpacking python3-setuptools (20.10.1-1.1) ...
Selecting previously unselected package python-urllib3.
Preparing to unpack .../python-urllib3_1.15.1-2_all.deb ...
Unpacking python-urllib3 (1.15.1-2) ...
Selecting previously unselected package openssl.
Preparing to unpack .../openssl_1.0.2h-1_amd64.deb ...
Unpacking openssl (1.0.2h-1) ...
Selecting previously unselected package ca-certificates.
Preparing to unpack .../ca-certificates_20160104_all.deb ...
Unpacking ca-certificates (20160104) ...
Selecting previously unselected package python-chardet.
Preparing to unpack .../python-chardet_2.3.0-2_all.deb ...
Unpacking python-chardet (2.3.0-2) ...
Selecting previously unselected package python-requests.
Preparing to unpack .../python-requests_2.10.0-2_all.deb ...
Unpacking python-requests (2.10.0-2) ...
Selecting previously unselected package python-boto.
Preparing to unpack .../python-boto_2.40.0-1_all.deb ...
Unpacking python-boto (2.40.0-1) ...
Selecting previously unselected package python3-six.
Preparing to unpack .../python3-six_1.10.0-3_all.deb ...
Unpacking python3-six (1.10.0-3) ...
Selecting previously unselected package python3-urllib3.
Preparing to unpack .../python3-urllib3_1.15.1-2_all.deb ...
Unpacking python3-urllib3 (1.15.1-2) ...
Selecting previously unselected package python3-chardet.
Preparing to unpack .../python3-chardet_2.3.0-2_all.deb ...
Unpacking python3-chardet (2.3.0-2) ...
Selecting previously unselected package python3-requests.
Preparing to unpack .../python3-requests_2.10.0-2_all.deb ...
Unpacking python3-requests (2.10.0-2) ...
Selecting previously unselected package python3-boto.
Preparing to unpack .../python3-boto_2.40.0-1_all.deb ...
Unpacking python3-boto (2.40.0-1) ...
Selecting previously unselected package python-requests-toolbelt.
Preparing to unpack .../python-requests-toolbelt_0.6.0-2_all.deb ...
Unpacking python-requests-toolbelt (0.6.0-2) ...
Selecting previously unselected package python3-requests-toolbelt.
Preparing to unpack .../python3-requests-toolbelt_0.6.0-2_all.deb ...
Unpacking python3-requests-toolbelt (0.6.0-2) ...
Processing triggers for man-db (2.7.5-1) ...
Setting up python-all (2.7.11-2) ...
Setting up python3-all (3.5.1-4) ...
Setting up python-setuptools (20.10.1-1.1) ...
Setting up python3-pkg-resources (20.10.1-1.1) ...
Setting up python3-setuptools (20.10.1-1.1) ...
Setting up python-urllib3 (1.15.1-2) ...
Setting up openssl (1.0.2h-1) ...
Setting up ca-certificates (20160104) ...
Setting up python-chardet (2.3.0-2) ...
Setting up python-requests (2.10.0-2) ...
Setting up python-boto (2.40.0-1) ...
Setting up python3-six (1.10.0-3) ...
Setting up python3-urllib3 (1.15.1-2) ...
Setting up python3-chardet (2.3.0-2) ...
Setting up python3-requests (2.10.0-2) ...
Setting up python3-boto (2.40.0-1) ...
Setting up python-requests-toolbelt (0.6.0-2) ...
Setting up python3-requests-toolbelt (0.6.0-2) ...
Setting up python-bioblend-build-deps (0.7.0-1) ...
Processing triggers for ca-certificates (20160104) ...
Updating certificates in /etc/ssl/certs...
173 added, 0 removed; done.
Running hooks in /etc/ca-certificates/update.d...
done.
**************************************************************************************
** Environment **
**************************************************************************************
PATH=/home/lamby/git/projects/dotfiles/dotfiles/..//bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
HOSTNAME=cd262354b627
TERM=xterm
PAGER=more
DISPLAY=:0
DOCKER_IMAGE=lamby-debian-sid
DEB_BUILD_OPTIONS=parallel=9
PIP_DOWNLOAD_CACHE=/home/lamby/.cache/pip
HOME=/home/lamby
LOGNAME=lamby
SHLVL=1
PWD=/home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0
OLDPWD=/home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend
GPG_TTY=/dev/console
QUILT_PATCHES=debian/patches
QUILT_NO_DIFF_INDEX=1
QUILT_REFRESH_ARGS=-p ab --no-timestamps --no-index
DEBEMAIL=lamby at debian.org
DEBFULLNAME=Chris Lamb
EDITOR=vim
LESS=-cgiFx4M
BLASTER=A220 I5 D1 H5 P330 T6
_=/usr/bin/env
**************************************************************************************
** Building python-bioblend 0.7.0-1 on amd64 **
**************************************************************************************
dpkg-buildpackage -rfakeroot -D -us -uc -b
dpkg-buildpackage: info: source package python-bioblend
dpkg-buildpackage: info: source version 0.7.0-1
dpkg-buildpackage: info: source distribution unstable
dpkg-buildpackage: info: source changed by Steffen Moeller <moeller at debian.org>
dpkg-source --before-build python-bioblend-0.7.0
dpkg-buildpackage: info: host architecture amd64
fakeroot debian/rules clean
dh clean --with python2,python3 --buildsystem=pybuild
dh_testdir -O--buildsystem=pybuild
debian/rules override_dh_auto_clean
make[1]: Entering directory '/home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0'
dh_clean
rm -rf bioblend.egg-info .eggs .pybuild _build docs/_build
find . -name "*.pyc" -delete
make[1]: Leaving directory '/home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0'
dh_clean -O--buildsystem=pybuild
debian/rules build
dh build --with python2,python3 --buildsystem=pybuild
dh_testdir -O--buildsystem=pybuild
dh_update_autotools_config -O--buildsystem=pybuild
dh_auto_configure -O--buildsystem=pybuild
I: pybuild base:184: python2.7 setup.py config
running config
I: pybuild base:184: python3.5 setup.py config
running config
dh_auto_build -O--buildsystem=pybuild
I: pybuild base:184: /usr/bin/python setup.py build
running build
running build_py
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend
copying bioblend/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend
copying bioblend/config.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend
copying bioblend/galaxyclient.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/toolshed
copying bioblend/toolshed/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/toolshed
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/cloudman
copying bioblend/cloudman/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/cloudman
copying bioblend/cloudman/launch.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/cloudman
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/util
copying bioblend/util/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/util
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy
copying bioblend/galaxy/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy
copying bioblend/galaxy/client.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/toolshed/repositories
copying bioblend/toolshed/repositories/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/toolshed/repositories
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/toolshed/tools
copying bioblend/toolshed/tools/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/toolshed/tools
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/toolshed
copying bioblend/galaxy/toolshed/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/toolshed
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/users
copying bioblend/galaxy/users/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/users
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/dataset_collections
copying bioblend/galaxy/dataset_collections/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/dataset_collections
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/folders
copying bioblend/galaxy/folders/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/folders
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/ftpfiles
copying bioblend/galaxy/ftpfiles/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/ftpfiles
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/config
copying bioblend/galaxy/config/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/config
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/groups
copying bioblend/galaxy/groups/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/groups
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/histories
copying bioblend/galaxy/histories/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/histories
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/workflows
copying bioblend/galaxy/workflows/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/workflows
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/forms
copying bioblend/galaxy/forms/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/forms
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/jobs
copying bioblend/galaxy/jobs/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/jobs
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/roles
copying bioblend/galaxy/roles/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/roles
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/objects
copying bioblend/galaxy/objects/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/objects
copying bioblend/galaxy/objects/wrappers.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/objects
copying bioblend/galaxy/objects/client.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/objects
copying bioblend/galaxy/objects/galaxy_instance.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/objects
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/libraries
copying bioblend/galaxy/libraries/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/libraries
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/visual
copying bioblend/galaxy/visual/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/visual
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/quotas
copying bioblend/galaxy/quotas/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/quotas
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/datasets
copying bioblend/galaxy/datasets/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/datasets
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/tools
copying bioblend/galaxy/tools/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/tools
copying bioblend/galaxy/tools/inputs.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/tools
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/datatypes
copying bioblend/galaxy/datatypes/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/datatypes
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/genomes
copying bioblend/galaxy/genomes/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/genomes
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/tool_data
copying bioblend/galaxy/tool_data/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_2.7/build/bioblend/galaxy/tool_data
I: pybuild base:184: /usr/bin/python3 setup.py build
running build
running build_py
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend
copying bioblend/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend
copying bioblend/config.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend
copying bioblend/galaxyclient.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/toolshed
copying bioblend/toolshed/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/toolshed
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/cloudman
copying bioblend/cloudman/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/cloudman
copying bioblend/cloudman/launch.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/cloudman
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/util
copying bioblend/util/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/util
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy
copying bioblend/galaxy/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy
copying bioblend/galaxy/client.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/toolshed/repositories
copying bioblend/toolshed/repositories/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/toolshed/repositories
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/toolshed/tools
copying bioblend/toolshed/tools/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/toolshed/tools
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/toolshed
copying bioblend/galaxy/toolshed/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/toolshed
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/users
copying bioblend/galaxy/users/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/users
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/dataset_collections
copying bioblend/galaxy/dataset_collections/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/dataset_collections
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/folders
copying bioblend/galaxy/folders/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/folders
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/ftpfiles
copying bioblend/galaxy/ftpfiles/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/ftpfiles
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/config
copying bioblend/galaxy/config/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/config
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/groups
copying bioblend/galaxy/groups/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/groups
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/histories
copying bioblend/galaxy/histories/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/histories
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/workflows
copying bioblend/galaxy/workflows/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/workflows
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/forms
copying bioblend/galaxy/forms/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/forms
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/jobs
copying bioblend/galaxy/jobs/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/jobs
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/roles
copying bioblend/galaxy/roles/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/roles
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/objects
copying bioblend/galaxy/objects/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/objects
copying bioblend/galaxy/objects/wrappers.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/objects
copying bioblend/galaxy/objects/client.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/objects
copying bioblend/galaxy/objects/galaxy_instance.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/objects
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/libraries
copying bioblend/galaxy/libraries/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/libraries
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/visual
copying bioblend/galaxy/visual/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/visual
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/quotas
copying bioblend/galaxy/quotas/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/quotas
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/datasets
copying bioblend/galaxy/datasets/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/datasets
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/tools
copying bioblend/galaxy/tools/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/tools
copying bioblend/galaxy/tools/inputs.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/tools
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/datatypes
copying bioblend/galaxy/datatypes/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/datatypes
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/genomes
copying bioblend/galaxy/genomes/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/genomes
creating /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/tool_data
copying bioblend/galaxy/tool_data/__init__.py -> /home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/.pybuild/pythonX.Y_3.5/build/bioblend/galaxy/tool_data
debian/rules override_dh_auto_test
make[1]: Entering directory '/home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0'
echo "No auto tests without CloudMan"
No auto tests without CloudMan
make[1]: Leaving directory '/home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0'
fakeroot debian/rules binary
dh binary --with python2,python3 --buildsystem=pybuild
dh_testroot -O--buildsystem=pybuild
dh_prep -O--buildsystem=pybuild
debian/rules override_dh_auto_install
make[1]: Entering directory '/home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0'
cd docs && make man
make[2]: Entering directory '/home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/docs'
sphinx-build -b man -d _build/doctrees . _build/man
make[2]: sphinx-build: Command not found
Makefile:117: recipe for target 'man' failed
make[2]: *** [man] Error 127
make[2]: Leaving directory '/home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0/docs'
debian/rules:13: recipe for target 'override_dh_auto_install' failed
make[1]: *** [override_dh_auto_install] Error 2
make[1]: Leaving directory '/home/lamby/temp/cdt.20160703181626.2BICF1DFS3.python-bioblend/python-bioblend-0.7.0'
debian/rules:9: recipe for target 'binary' failed
make: *** [binary] Error 2
[..]
The full build log is attached.
Regards,
--
,''`.
: :' : Chris Lamb
`. `'` lamby at debian.org / chris-lamb.co.uk
`-
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