[R-pkg-team] Bug#966523: r-bioc-rsubread FTBFS on 32bit: error: conflicting types for ‘uintptr_t’

[Andreas Tille]

Hi,

I'm hereby forwarding a problem that was detected on the Debian packaged
version of Rsubread.  Any idea how to fix this?

Kind regards

       Andreas.

On Thu, Jul 30, 2020 at 08:50:31AM +0300, Adrian Bunk wrote:
> Source: r-bioc-rsubread
> Version: 2.2.5-1
> Severity: serious
> Tags: ftbfs
> 
> https://buildd.debian.org/status/package.php?p=r-bioc-rsubread&suite=sid
> 
> ...
> In file included from /usr/lib/gcc/i686-linux-gnu/10/include/stdint.h:9,
>                  from HelperFunctions.h:139,
>                  from R_wrapper.c:35:
> /usr/include/stdint.h:96:23: error: conflicting types for ‘uintptr_t’
>    96 | typedef unsigned int  uintptr_t;
>       |                       ^~~~~~~~~
> In file included from R_wrapper.c:30:
> /usr/share/R/include/Rinterface.h:110:24: note: previous declaration of ‘uintptr_t’ was here
>   110 |  typedef unsigned long uintptr_t;
>       |                        ^~~~~~~~~
> make[1]: *** [/usr/lib/R/etc/Makeconf:167: R_wrapper.o] Error 1

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