[R-pkg-team] Bug#1005503: cdkr: FTBFS: [javac] /<<PKGBUILDDIR>>/rcdkjar/src/org/guha/rcdk/util/Misc.java:14: error: package org.openscience.cdk.inchi does not exist

[Lucas Nussbaum]

Source: cdkr
Version: 3.6.0+dfsg-1
Severity: serious
Justification: FTBFS
Tags: bookworm sid ftbfs
User: lucas at debian.org
Usertags: ftbfs-20220212 ftbfs-bookworm

Hi,

During a rebuild of all packages in sid, your package failed to build
on amd64.


Relevant part (hopefully):
> make[1]: Entering directory '/<<PKGBUILDDIR>>'
> ant -buildfile rcdkjar/build.xml
> Buildfile: /<<PKGBUILDDIR>>/rcdkjar/build.xml
> 
> compile:
>     [mkdir] Created dir: /<<PKGBUILDDIR>>/rcdkjar/classes
>     [javac] Compiling 18 source files to /<<PKGBUILDDIR>>/rcdkjar/classes
>     [javac] warning: [options] bootstrap class path not set in conjunction with -source 8
>     [javac] /<<PKGBUILDDIR>>/rcdkjar/src/org/guha/rcdk/util/Misc.java:14: error: package org.openscience.cdk.inchi does not exist
>     [javac] import org.openscience.cdk.inchi.InChIGenerator;
>     [javac]                                 ^
>     [javac] /<<PKGBUILDDIR>>/rcdkjar/src/org/guha/rcdk/util/Misc.java:15: error: package org.openscience.cdk.inchi does not exist
>     [javac] import org.openscience.cdk.inchi.InChIGeneratorFactory;
>     [javac]                                 ^
>     [javac] Note: Some input files use or override a deprecated API.
>     [javac] Note: Recompile with -Xlint:deprecation for details.
>     [javac] 2 errors
>     [javac] 1 warning
> 
> BUILD FAILED
> /<<PKGBUILDDIR>>/rcdkjar/build.xml:26: Compile failed; see the compiler error output for details.
> 
> Total time: 1 second
> make[1]: *** [debian/rules:11: override_dh_auto_build] Error 1


The full build log is available from:
http://qa-logs.debian.net/2022/02/12/cdkr_3.6.0+dfsg-1_unstable.log

A list of current common problems and possible solutions is available at
http://wiki.debian.org/qa.debian.org/FTBFS . You're welcome to contribute!

If you reassign this bug to another package, please marking it as 'affects'-ing
this package. See https://www.debian.org/Bugs/server-control#affects

If you fail to reproduce this, please provide a build log and diff it with mine
so that we can identify if something relevant changed in the meantime.