[R-pkg-team] Bug#1042776: Bug#1042776: Bug#1042776: r-bioc-deseq: still depends on obsolete r-api-bioc-3.16

Charles Plessy plessy at debian.org
Tue Aug 1 04:02:18 BST 2023


Le Tue, Aug 01, 2023 at 09:29:59AM +0900, Charles Plessy a écrit :
> 
> the DESeq Bioconductor package was removed from the 3.17 release
> upstream.  I think that we can remove it from unstable and testing too.
> 
> I will fill a removal later today.

Actually it was removed from BioC 3.10 and the fix is easy, so I just
uploaded a fixed version.

I will still fill a removal unless somebody objects.  The replacement
package, r-bioc-deseq2, is well established and I am not aware of
people or pipelines using the old version.

I note that the med-bio-dev metapackage will need to be updated
accordingly.  I can to so after my joini request is accepted.

Have a nice day,

Charles

-- 
Charles Plessy                         Nagahama, Yomitan, Okinawa, Japan
Debian Med packaging team         http://www.debian.org/devel/debian-med
Tooting from home,                 https://framapiaf.org/@charles_plessy
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