[med-svn] [Git][med-team/bowtie2][upstream] New upstream version 2.4.1

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch upstream at Debian Med / bowtie2


Commits:
28c3e098 by Michael R. Crusoe at 2020-03-01T11:16:53+01:00
New upstream version 2.4.1
- - - - -


30 changed files:

- CMakeLists.txt
- − Dockerfile-aarch64
- MANUAL
- MANUAL.markdown
- Makefile
- NEWS
- README.md
- VERSION
- aligner_seed_policy.cpp
- aln_sink.cpp
- alphabet.cpp
- alphabet.h
- blockwise_sa.h
- bowtie2
- bowtie2-build
- bowtie2-inspect
- bt2_build.cpp
- bt2_idx.h
- bt2_search.cpp
- diff_sample.h
- doc/manual.html
- doc/website/faq.ssi
- doc/website/manual.ssi
- doc/website/old_news.ssi
- doc/website/recent_news.ssi
- doc/website/rhsidebar.ssi
- filebuf.h
- outq.cpp
- outq.h
- pat.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bowtie2/-/commit/28c3e098016c243c6306658d50c809de378cff1e

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