[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
f1997e67 by Andreas Tille at 2020-04-09T01:44:46+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Wed, 08 Apr 2020 13:42:03 +0000
+Last-Update: Thu, 09 Apr 2020 01:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------


=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Wed, 08 Apr 2020 13:42:04 +0000
+Last-Update: Thu, 09 Apr 2020 01:42:03 +0000
 
  source                        |             version             |        upstream_version         |                     uploaders                                           | Last uploader        |     Last uploaded      
 -------------------------------+---------------------------------+---------------------------------+-------------------------------------------------------------------------+----------------------+------------------------
@@ -172,7 +172,6 @@ Last-Update: Wed, 08 Apr 2020 13:42:04 +0000
  metaphlan2-data               | 839925 | important | metaphlan2-data: postinst deletes shipped file: /var/lib/metaphlan2-data/markers.fasta
  mipe                          | 890788 | minor     | mipe: Please provide autopkgtest
  mriconvert                    | 617342 | normal    | 32-bit multiframe image conversion ignores frames
- mypy                          | 952757 | minor     | mypy(1): build errors in man page
  nanopolish                    | 956136 | serious   | nanopolish: FTBFS (undefined references)
  ncbi-blast+                   | 891197 | normal    | Please switch to pcre2
  ncbi-tools6                   | 225651 | wishlist  | ncbi-tools-x11: want Cn3D++
@@ -206,7 +205,6 @@ Last-Update: Wed, 08 Apr 2020 13:42:04 +0000
  prokka                        | 924128 | normal    | prokka: creates world writable directory tree /var/lib/prokka/*
  psychopy                      | 730810 | normal    | psychopy: Movie support suboptimal
  psychopy                      | 829424 | normal    | psychopy: ioHub uses inappropriate PID file location
- psychopy                      | 953052 | important | psychopy: python2 dependencies
  psychopy                      | 953053 | important | psychopy: missing python3 dependencies
  pynast                        | 937488 | serious   | pynast: Python2 removal in sid/bullseye
  pynast                        | 948081 | serious   | pynast build depends on and recommends the removed blast2 transitional package
@@ -221,8 +219,8 @@ Last-Update: Wed, 08 Apr 2020 13:42:04 +0000
  python-pbcore                 | 919052 | normal    | python-pbcore: some docs for pbcore are not found
  python-pysam                  | 938092 | normal    | python-pysam: Python2 removal in sid/bullseye
  python-ruffus                 | 841073 | wishlist  | python-ruffus: Needs 18 GB of RAM to build
- python-tinyalign              | 952603 | normal    | python-tinyalign: license of buildwheels.sh is CC0
  q2cli                         | 954601 | serious   | q2cli: FTBFS: dh_auto_test: error: pybuild --test --test-nose -i python{version} -p 3.8 -s custom "--test-args=cd {build_dir}; HOME=/<<PKGBUILDDIR>> QIIMETEST= nosetests3" returned exit code 13
+ q2-cutadapt                   | 956220 | normal    | FTBFS: FileNotFoundError
  q2-demux                      | 950933 | normal    | q2-demux: FTBFS with pandas 1.0: test failures
  q2templates                   | 950931 | normal    | q2templates: FTBFS with pandas 1.0: test failures
  q2-types                      | 950932 | normal    | q2-types: FTBFS with pandas 1.0: test failures
@@ -255,6 +253,7 @@ Last-Update: Wed, 08 Apr 2020 13:42:04 +0000
  sprai                         | 943280 | normal    | sprai: Python2 removal in sid/bullseye
  sra-sdk                       | 943231 | normal    | sra-sdk: Python2 removal in sid/bullseye
  sra-sdk                       | 952623 | serious   | sra-sdk: FTBFS: ld: /usr/lib/x86_64-linux-gnu/libncbi-vdb.so: undefined reference to `vdb_mbedtls_entropy_init'
+ sumaclust                     | 956232 | normal    | sumaclust: Last sequence of input is skipped on arm64
  tree-puzzle                   | 806214 | normal    | tree-puzzle: Package fails test suite
  tree-puzzle                   | 890790 | minor     | tree-puzzle: Please provide autopkgtest
  tree-puzzle                   | 951984 | serious   | tree-puzzle: FTBFS: mpi.h:322:57: error: static assertion failed: "MPI_Address was removed in MPI-3.0.  Use MPI_Get_address instead."
@@ -265,5 +264,5 @@ Last-Update: Wed, 08 Apr 2020 13:42:04 +0000
  xmedcon                       | 671828 | normal    | xmedcon: Cannot open file with YBR photometric interpretation
  xmedcon                       | 779707 | normal    | Errors when reading dicomdir file: "No images found" / "Loading: DICM Error reading file"
  xmedcon                       | 924017 | normal    | desktop entry
-(195 rows)
+(194 rows)
 



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f1997e672b98b3054d8fb07ed7bbd161a0dc1c17

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f1997e672b98b3054d8fb07ed7bbd161a0dc1c17
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