[med-svn] [Git][med-team/salmon][upstream] New upstream version 1.2.1+ds1

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch upstream at Debian Med / salmon


Commits:
7e1f5913 by Michael R. Crusoe at 2020-04-22T18:58:18+02:00
New upstream version 1.2.1+ds1
- - - - -


30 changed files:

- .drone/build.sh
- + .lgtm.yml
- .travis.yml
- CMakeLists.txt
- + CODE_OF_CONDUCT.md
- README.md
- current_version.txt
- doc/source/conf.py
- doc/source/salmon.rst
- doc/steps_to_prepare_release.md
- docker/Dockerfile
- docker/build_test.sh
- include/AlevinOpts.hpp
- include/AlevinUtils.hpp
- include/AlignmentLibrary.hpp
- include/AtomicMatrix.hpp
- include/BAMQueue.tpp
- include/BAMUtils.hpp
- − include/BWAMemStaticFuncs.hpp
- − include/BWAUtils.hpp
- include/BarcodeGroup.hpp
- include/CollapsedCellOptimizer.hpp
- include/EMUtils.hpp
- include/EquivalenceClassBuilder.hpp
- include/GZipWriter.hpp
- − include/KmerIntervalMap.hpp
- − include/LightweightAlignmentDefs.hpp
- include/NullFragmentFilter.hpp
- include/ProgramOptionsGenerator.hpp
- include/ReadExperiment.hpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/salmon/-/commit/7e1f591374a0bcb0b1ec5e8e9183d01fadfe03ee

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