[med-svn] [Git][med-team/bedops][upstream] New upstream version 2.4.39+dfsg

[Steffen Möller]

Steffen Möller pushed to branch upstream at Debian Med / bedops


Commits:
13ce897e by Steffen Moeller at 2020-04-27T15:58:12+02:00
New upstream version 2.4.39+dfsg
- - - - -


30 changed files:

- Makefile
- README.md
- applications/bed/bedextract/src/ExtractRows.cpp
- applications/bed/bedmap/src/Bedmap.cpp
- applications/bed/bedmap/src/Input.hpp
- applications/bed/bedmap/src/TDefs.hpp
- applications/bed/bedops/src/BedPadReader.hpp
- applications/bed/bedops/src/Bedops.cpp
- applications/bed/bedops/src/Input.hpp
- applications/bed/closestfeats/src/BedReader.hpp
- applications/bed/closestfeats/src/ClosestFeature.cpp
- applications/bed/closestfeats/src/Input.hpp
- applications/bed/closestfeats/src/Printers.hpp
- applications/bed/conversion/src/convert2bed.c
- applications/bed/conversion/src/convert2bed.h
- applications/bed/conversion/src/tests/gtf/sample.expected.bed
- applications/bed/conversion/src/tests/gtf/sample.expected.gzip.starch
- applications/bed/conversion/src/tests/gtf/sample.expected.starch
- applications/bed/sort-bed/src/CheckSort.cpp
- applications/bed/sort-bed/src/Sort.cpp
- applications/bed/sort-bed/src/SortDetails.cpp
- applications/bed/sort-bed/src/Structures.hpp
- applications/bed/sort-bed/src/update-sort-bed-migrate-candidates.py
- applications/bed/sort-bed/src/update-sort-bed-slurm.py
- applications/bed/sort-bed/src/update-sort-bed-starch-slurm.py
- applications/bed/starch/src/Makefile.darwin
- applications/bed/starch/src/starch-diff.py
- applications/bed/starch/src/starch.c
- applications/bed/starch/src/starch.h
- applications/bed/starch/src/starchcat.c


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/bedops/-/commit/13ce897e1a2dc7b26e784df22950fe9b24708ced

-- 
View it on GitLab: https://salsa.debian.org/med-team/bedops/-/commit/13ce897e1a2dc7b26e784df22950fe9b24708ced
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200427/0991aa0c/attachment.html>