[med-svn] [Git][med-team/toil][upstream] New upstream version 4.2.0

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch upstream at Debian Med / toil


Commits:
3840d76f by Michael R. Crusoe at 2020-08-27T10:10:55+02:00
New upstream version 4.2.0
- - - - -


30 changed files:

- .gitlab-ci.yml
- README.rst
- docs/conf.py
- docs/running/cliOptions.rst
- docs/running/cloud/amazon.rst
- docs/running/cloud/cloud.rst
- docs/running/cloud/clusterUtils.rst
- + docs/running/cloud/kubernetes.rst
- setup.py
- src/toil/__init__.py
- src/toil/batchSystems/kubernetes.py
- src/toil/batchSystems/lsf.py
- src/toil/batchSystems/lsfHelper.py
- src/toil/batchSystems/mesos/executor.py
- src/toil/batchSystems/singleMachine.py
- src/toil/batchSystems/slurm.py
- src/toil/common.py
- src/toil/cwl/cwltoil.py
- src/toil/deferred.py
- src/toil/fileStores/cachingFileStore.py
- src/toil/job.py
- src/toil/jobGraph.py
- src/toil/jobStores/fileJobStore.py
- src/toil/leader.py
- src/toil/lib/bioio.py
- src/toil/lib/docker.py
- src/toil/lib/misc.py
- src/toil/lib/threading.py
- src/toil/provisioners/__init__.py
- src/toil/provisioners/abstractProvisioner.py


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/toil/-/commit/3840d76ff991c82f676815c4dcc8612ca7f918b6

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