[med-svn] [Git][med-team/diamond-aligner][master] 6 commits: New upstream version 2.0.4

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / diamond-aligner


Commits:
b8326e5f by Michael R. Crusoe at 2020-08-31T13:49:39+02:00
New upstream version 2.0.4
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977047af by Michael R. Crusoe at 2020-08-31T13:49:39+02:00
routine-update: New upstream version

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e589edda by Michael R. Crusoe at 2020-08-31T13:49:41+02:00
Update upstream source from tag 'upstream/2.0.4'

Update to upstream version '2.0.4'
with Debian dir e5c702eb06d479cbb5646cdcfc7e4b83229c702b
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5d8a4225 by Michael R. Crusoe at 2020-08-31T15:06:19+02:00
fix typos

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82ad64e7 by Michael R. Crusoe at 2020-08-31T15:29:27+02:00
fix cross building with test invocation

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8a89ff55 by Michael R. Crusoe at 2020-08-31T15:29:33+02:00
release 2.0.4-1

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30 changed files:

- CMakeLists.txt
- Dockerfile
- debian/changelog
- + debian/patches/series
- + debian/patches/spelling
- debian/rules
- src/ChangeLog
- src/align/align.cpp
- src/align/culling.cpp
- + src/align/culling.h
- src/align/extend.cpp
- src/align/extend.h
- src/align/gapped.cpp
- src/align/gapped_filter.cpp
- src/align/legacy/banded_swipe_pipeline.cpp
- src/align/legacy/query_mapper.cpp
- + src/align/memory.cpp
- src/align/output.cpp
- src/align/ranking.cpp
- src/align/target.h
- src/align/ungapped.cpp
- src/basic/basic.cpp
- src/basic/config.cpp
- src/basic/config.h
- src/basic/const.h
- src/basic/hssp.cpp
- src/basic/match.h
- src/basic/parameters.h
- src/basic/sequence.h
- src/basic/statistics.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/c385194fcc39669872019df644b7971b1c009a15...8a89ff551dc2f2307f768c44ddf3105616e3599f

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View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/compare/c385194fcc39669872019df644b7971b1c009a15...8a89ff551dc2f2307f768c44ddf3105616e3599f
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