[med-svn] [Git][med-team/diamond-aligner][upstream] New upstream version 2.0.4

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch upstream at Debian Med / diamond-aligner


Commits:
b8326e5f by Michael R. Crusoe at 2020-08-31T13:49:39+02:00
New upstream version 2.0.4
- - - - -


30 changed files:

- CMakeLists.txt
- Dockerfile
- src/ChangeLog
- src/align/align.cpp
- src/align/culling.cpp
- + src/align/culling.h
- src/align/extend.cpp
- src/align/extend.h
- src/align/gapped.cpp
- src/align/gapped_filter.cpp
- src/align/legacy/banded_swipe_pipeline.cpp
- src/align/legacy/query_mapper.cpp
- + src/align/memory.cpp
- src/align/output.cpp
- src/align/ranking.cpp
- src/align/target.h
- src/align/ungapped.cpp
- src/basic/basic.cpp
- src/basic/config.cpp
- src/basic/config.h
- src/basic/const.h
- src/basic/hssp.cpp
- src/basic/match.h
- src/basic/parameters.h
- src/basic/sequence.h
- src/basic/statistics.h
- src/cluster/multi_step_cluster.cpp
- src/data/reference.cpp
- src/data/reference.h
- src/dp/dp.h


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/commit/b8326e5ffd4b9f76926364fa849c1513660c3e9a

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View it on GitLab: https://salsa.debian.org/med-team/diamond-aligner/-/commit/b8326e5ffd4b9f76926364fa849c1513660c3e9a
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