[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

Andreas Tille gitlab at salsa.debian.org
Sat Mar 28 01:44:56 GMT 2020



Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
f425c744 by Andreas Tille at 2020-03-28T01:44:52+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Fri, 27 Mar 2020 13:42:03 +0000
+Last-Update: Sat, 28 Mar 2020 01:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------


=====================================
outdated_med-packages.txt
=====================================
@@ -1,12 +1,11 @@
-Last-Update: Fri, 27 Mar 2020 13:42:03 +0000
+Last-Update: Sat, 28 Mar 2020 01:42:03 +0000
 
  source                        |             version             |        upstream_version         |                      uploaders                                            | Last uploader        |     Last uploaded      
 -------------------------------+---------------------------------+---------------------------------+---------------------------------------------------------------------------+----------------------+------------------------
  atropos                       | 1.1.24                          | 2.0.0-alpha.4                   | Andreas Tille                                                             | Steffen Moeller      | 2019-11-30 12:19:31+00
  baitfisher                    | 1.2.7+git20180107.e92dbf2       | 1.2.7+git20190123.241d060       | Olivier Sallou                                                            | Andreas Tille        | 2018-09-24 13:04:18+00
- beagle                        | 5.1-191125                      | 200324                          | Dylan Aïssi                                                              | Dylan Aïssi         | 2019-12-14 18:34:10+00
  beast2-mcmc                   | 2.6.0                           | 2.6.2                           | Andreas Tille,Olivier Sallou                                              | Andreas Tille        | 2019-07-31 13:08:02+00
- biobambam2                    | 2.0.153                         | 2.0.159+ds                      | Andreas Tille                                                             | Andreas Tille        | 2020-02-05 13:20:41+00
+ biobambam2                    | 2.0.160                         | 2.0.160+ds                      | Andreas Tille                                                             | Andreas Tille        | 2020-03-27 10:34:45+00
  biomaj3-core                  | 3.0.19                          | 3.0.22                          | Olivier Sallou                                                            | Olivier Sallou       | 2019-11-12 11:20:23+00
  biomaj3-process               | 3.0.15                          | 3.0.16                          | Olivier Sallou                                                            | Olivier Sallou       | 2019-11-12 11:20:38+00
  biosig4c++                    | 1.9.5                           | 2.0.2                           | Michael Hanke,Yaroslav Halchenko                                          | Andreas Tille        | 2020-03-02 08:38:37+00
@@ -16,7 +15,6 @@ Last-Update: Fri, 27 Mar 2020 13:42:03 +0000
  daligner                      | 1.0+git20200115.c2b47da         | 1.0+git20200322.477d5b9         | Andreas Tille                                                             | Andreas Tille        | 2020-01-28 10:34:12+00
  dazzdb                        | 1.0+git20200115.d8adde7         | 1.0+git20200322.ba88d76         | Andreas Tille                                                             | Andreas Tille        | 2020-01-23 16:34:35+00
  dcm2niix                      | 1.0.20181125                    | 1.0.20190902                    | Ghislain Antony Vaillant                                                  | Andreas Tille        | 2019-01-30 10:04:52+00
- diamond-aligner               | 0.9.30                          | 0.9.31                          | Andreas Tille                                                             | Michael R. Crusoe    | 2020-02-17 13:34:16+00
  fis-gtm                       | 6.3-007                         | 6.3-010                         | Amul Shah,Andreas Tille                                                   | Amul Shah            | 2019-02-28 14:12:19+00
  gatb-core                     | 1.4.1+git20191209.9398f28       | 1.4.1+git20200118.1dc23ff       | Andreas Tille,Nadiya Sitdykova                                            | Michael R. Crusoe    | 2020-02-17 14:52:30+00
  gmap                          | 2019-09-12                      | 2020-03-12                      | Alexandre Mestiashvili,Andreas Tille,Shaun Jackman                        | Steffen Moeller      | 2019-12-30 12:37:15+00
@@ -31,6 +29,7 @@ Last-Update: Fri, 27 Mar 2020 13:42:03 +0000
  kma                           | 1.2.21                          | 1.2.22                          | Andreas Tille                                                             | Steffen Moeller      | 2020-01-17 22:54:10+00
  libbioparser-dev              | 2.0.1                           | 2.1.2                           | Andreas Tille                                                             | Andreas Tille        | 2019-07-15 13:35:45+00
  libjloda-java                 | 0.0+git20180523.cbaf6d1         | 0.0+git20200318.6fef1b7         | Andreas Tille                                                             | Andreas Tille        | 2018-05-25 21:49:43+00
+ libmaus2                      | 2.0.713                         | 2.0.714                         | Andreas Tille,Steffen Moeller                                             | Andreas Tille        | 2020-03-27 09:34:39+00
  libsis-base-java              | 18.09~pre1+git20180827.fe4953e  | 18.09~pre1+git20180928.45fbd31  | Andreas Tille,Olivier Sallou,Tim Booth                                    | Andreas Tille        | 2018-09-26 08:35:30+00
  libthread-pool                | 2.0.1                           | 2.0.2                           | Andreas Tille                                                             | Andreas Tille        | 2019-11-19 21:21:23+00
  metaphlan2                    | 2.9.22                          | 2.96.1                          | Andreas Tille                                                             | Andreas Tille        | 2019-11-08 07:19:11+00
@@ -60,7 +59,7 @@ Last-Update: Fri, 27 Mar 2020 13:42:03 +0000
  sumatra                       | 1.0.31                          | 1.0.34                          | Andreas Tille,Tim Booth                                                   | Andreas Tille        | 2018-10-16 10:06:33+00
  t-coffee                      | 12.00.7fb08c2                   | 13.41.0.28bdc39                 | Andreas Tille,Steffen Moeller                                             | Andreas Tille        | 2019-02-15 07:57:10+00
  xmedcon                       | 0.16.1                          | 0.16.2                          | Andreas Tille,Roland Marcus Rutschmann                                    | Andreas Tille        | 2019-01-25 18:23:59+00
-(58 rows)
+(57 rows)
 
 
  source                        |   id   | severity  |                                                                                               title                                                                                               
@@ -180,6 +179,7 @@ Last-Update: Fri, 27 Mar 2020 13:42:03 +0000
  ncbi-vdb                      | 952627 | serious   | libncbi-vdb2 uses undefined symbols
  ncbi-vdb                      | 953897 | serious   | libncbi-vdb2 uses undefined symbols
  nibabel                       | 868229 | normal    | NotImplementedError: Pixel Data is compressed in a format pydicom does not yet handle. Cannot return array
+ nitime                        | 955103 | important | nitime: FTBFS with Sphinx 2.4: AttributeError: 'Sphinx' object has no attribute 'info'
  nut-nutrition                 | 339838 | wishlist  | nut-nutrition: Would like to record 'snacks' and change the number of meals
  obitools                      | 935340 | normal    | obitools: Port to Python3 needed
  opencfu                       | 922589 | serious   | FTBFS against opencv 4.0.1 (exp)
@@ -246,6 +246,7 @@ Last-Update: Fri, 27 Mar 2020 13:42:03 +0000
  simka                         | 954273 | important | simka: arm64 autopkgtest time out
  simpleitk                     | 949355 | serious   | simpleitk FTBFS: test failures
  snakemake                     | 943956 | wishlist  | snakemake: please make the build reproducible
+ snakemake                     | 955056 | important | snakemake: FTBFS with Sphinx 2.4: AttributeError: 'member_descriptor' object has no attribute 'expandtabs'
  snap                          | 927011 | minor     | snap: Package info contains a 404 url
  snap-aligner                  | 848589 | normal    | snap-aligner: Build requires 188 GB of memory (fortunately not used, just allocated)
  sofa-framework                | 588278 | minor     | sofa-tutorials: Sofa tutorials config file tutorial.pro uses SOFA_DIR=../.. that is incorrect
@@ -269,5 +270,5 @@ Last-Update: Fri, 27 Mar 2020 13:42:03 +0000
  xmedcon                       | 671828 | normal    | xmedcon: Cannot open file with YBR photometric interpretation
  xmedcon                       | 779707 | normal    | Errors when reading dicomdir file: "No images found" / "Loading: DICM Error reading file"
  xmedcon                       | 924017 | normal    | desktop entry
-(204 rows)
+(206 rows)
 



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f425c744f494b62783b8f1430c98b7e56be37698

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/f425c744f494b62783b8f1430c98b7e56be37698
You're receiving this email because of your account on salsa.debian.org.


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200328/75b75d0d/attachment-0001.html>


More information about the debian-med-commit mailing list