[med-svn] [Git][med-team/hyphy][master] 4 commits: routine-update: New upstream version

[Michael R. Crusoe]

Michael R. Crusoe pushed to branch master at Debian Med / hyphy


Commits:
bb074df3 by Michael R. Crusoe at 2021-02-19T17:15:15+01:00
routine-update: New upstream version

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0f37b890 by Michael R. Crusoe at 2021-02-20T09:53:05+01:00
New upstream version 2.5.28+dfsg
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42e51e43 by Michael R. Crusoe at 2021-02-20T10:09:43+01:00
autopkgtests: don't skip two tests

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4682e91c by Michael R. Crusoe at 2021-02-20T10:09:43+01:00
routine-update: Ready to upload to unstable

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30 changed files:

- debian/changelog
- debian/tests/run-unit-tests
- res/TemplateBatchFiles/Distances/JC69
- res/TemplateBatchFiles/Distances/K2P
- res/TemplateBatchFiles/Distances/K2P_RV
- res/TemplateBatchFiles/Distances/Modified_Nei_Gojobori
- res/TemplateBatchFiles/Distances/Nei_Gojobori
- res/TemplateBatchFiles/Distances/PC
- res/TemplateBatchFiles/Distances/PC_MH
- res/TemplateBatchFiles/Distances/PC_RV
- res/TemplateBatchFiles/Distances/T3P
- res/TemplateBatchFiles/Distances/TN84
- res/TemplateBatchFiles/Distances/TN93
- res/TemplateBatchFiles/Distances/TN93_RV
- res/TemplateBatchFiles/Distances/p_Distance
- res/TemplateBatchFiles/Distances/p_Distance_aa
- res/TemplateBatchFiles/Distances/p_Distance_binary
- res/TemplateBatchFiles/Distances/p_Distance_codon
- res/TemplateBatchFiles/F_ST.bf
- res/TemplateBatchFiles/SelectionAnalyses/FEL.bf
- res/TemplateBatchFiles/SelectionAnalyses/MEME.bf
- res/TemplateBatchFiles/libv3/all-terms.bf
- + res/TemplateBatchFiles/libv3/models/codon/MSS.bf
- res/TemplateBatchFiles/libv3/tasks/estimators.bf
- res/TemplateBatchFiles/libv3/tasks/trees.bf
- res/TemplateBatchFiles/partitionSequences.ibf
- src/core/batchlan.cpp
- src/core/batchlanruntime.cpp
- src/core/dataset.cpp
- src/core/global_things.cpp


The diff was not included because it is too large.


View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/compare/8cb707d2dbbd6ec462403f48887c838cf4fca2c3...4682e91cbed5f0ba25d744916f58ec8678c5bb81

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View it on GitLab: https://salsa.debian.org/med-team/hyphy/-/compare/8cb707d2dbbd6ec462403f48887c838cf4fca2c3...4682e91cbed5f0ba25d744916f58ec8678c5bb81
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