[Debian-med-packaging] Bug#951280: fixed in ncbi-blast+ 2.9.0-4

[Aaron M. Ucko]

That's a fair request.  From a technical perspective, it should be
straightforward (the same change should work there), but I'll need to
get official approval from the Release Team.  There's also a version of
ncbi-blast+ in buster-backports that I should be able to fix more
readily, but I can understand if you'd rather leave backports alone.

Thanks for asking, and sorry you ran into trouble here.

-- Aaron

Patrice Duroux <duroux.patrice at orange.fr> writes:

> Hi,
>
> Thanks for the work.
> But is there any plan to solve it for ncbi-blast+ in Buster for which the bug
> report was addressed initially?
> Do I have to mix Buster / Sid on my system?
>
> Thanks,
> Patrice
>
> On Mon, 17 Feb 2020 01:50:53 +0000 Debian FTP Masters <
> ftpmaster at ftp-master.debian.org> wrote:
>> Source: ncbi-blast+
>> Source-Version: 2.9.0-4
>> Done: ucko at debian.org (Aaron M. Ucko)
>> 
>> We believe that the bug you reported is fixed in the latest version of
>> ncbi-blast+, which is due to be installed in the Debian FTP archive.
>> 
>> A summary of the changes between this version and the previous one is
>> attached.
>> 
>> Thank you for reporting the bug, which will now be closed.  If you
>> have further comments please address them to 951280 at bugs.debian.org,
>> and the maintainer will reopen the bug report if appropriate.
>> 
>> Debian distribution maintenance software
>> pp.
>> Aaron M. Ucko <ucko at debian.org> (supplier of updated ncbi-blast+ package)
>> 
>> (This message was generated automatically at their request; if you
>> believe that there is a problem with it please contact the archive
>> administrators by mailing ftpmaster at ftp-master.debian.org)
>> 
>> 
>> -----BEGIN PGP SIGNED MESSAGE-----
>> Hash: SHA256
>> 
>> Format: 1.8
>> Date: Sun, 16 Feb 2020 20:16:33 -0500
>> Source: ncbi-blast+
>> Architecture: source
>> Version: 2.9.0-4
>> Distribution: unstable
>> Urgency: high
>> Maintainer: Debian Med Packaging Team <
> debian-med-packaging at lists.alioth.debian.org>
>> Changed-By: Aaron M. Ucko <ucko at debian.org>
>> Closes: 951280
>> Changes:
>>  ncbi-blast+ (2.9.0-4) unstable; urgency=high
>>  .
>>    * debian/control: Standards-Version: 4.5.0 (already compliant).
>>    * debian/rules: DEB_CONFIGURE_COMMON_FLAGS += --without-sse42.
>>      (Closes: #951280.)
>> Checksums-Sha1:
>>  7427fdad6764091bcad72a436a1e8122ba980844 2297 ncbi-blast+_2.9.0-4.dsc
>>  54c7ff368b62216dc64943e3f9173690338e8001 29112 ncbi-blast+_2.9.0-
> 4.debian.tar.xz
>>  86c672c0d92dcd99fe73faaf13d1a355d152f84c 8853 ncbi-blast+_2.9.0-
> 4_source.buildinfo
>> Checksums-Sha256:
>>  26b9aa389bc41b8b570b3883374828f085244f66615ffa3ced38f64033dcfa04 2297 ncbi-
> blast+_2.9.0-4.dsc
>>  dc79f19dea2d581ba12957d7aa70d20accd83e50eacdc484e5d668f4e5c0c7b0 29112 ncbi-
> blast+_2.9.0-4.debian.tar.xz
>>  e2ea23323bad1095a5902aa169ba477fa2b9d3908b0d4bb51fd5faa296c2bbf4 8853 ncbi-
> blast+_2.9.0-4_source.buildinfo
>> Files:
>>  4db70f8ccc3c830edb570aef31da120f 2297 science optional ncbi-blast+_2.9.0-
> 4.dsc
>>  216a8b45f29c2419924a6f214bef27f0 29112 science optional ncbi-blast+_2.9.0-
> 4.debian.tar.xz
>>  5cf07deee0d0c1fa2f82b28099550fb8 8853 science optional ncbi-blast+_2.9.0-
> 4_source.buildinfo
>> 
>> -----BEGIN PGP SIGNATURE-----
>> 
>> iQIzBAEBCAAdFiEEfDq5z9IwvTDdAJxZHnCRsfFKZKIFAl5J6eoACgkQHnCRsfFK
>> ZKJ++A/+Ppu1Y69CUK3za3XrrgT+nHT3oZeinrdaysAXJNAITp3snwKJm6PgTdaM
>> 1YakzLrZtZ2pWvQ2qRMcvAnyGbM4mg6+7uia4SIRN+OwBji3nFX4NpRfVXQyQQ0N