[Neurodebian-users] Segmentation fault with ANTS tools

[Antti Korvenoja]

Hi!
Unfortunately it doesn't work even with the Normalize argument there.
Similar behaviour still.
Antti

to, 2012-03-08 kello 13:44 -0500, Yaroslav Halchenko kirjoitti:
> we both might have fell into RTFM trap ;)  or may be even more severe
> issue (I am not sure even if ANTS is building on wheezy ATM... so situation
> might vary).
> 
> So:
> ,----------------------------------------------------------------------------------
> | $> /usr/lib/ants/AverageImages
> |
> | Usage:
> |
> | /usr/lib/ants/AverageImages ImageDimension Outputfname.nii.gz Normalize <images>
> `---
> 
> mention that Normalize argument in there... so try
> 
> AverageImages 3 out.nii.gz 0 *.nii.gz
> 
> and please report back if that works for you :)
> 
> > Hello!
> 
> > I am trying to make a normalixed template with ANTS tools.When I run
> > AverageImages program I am getting segmentation fault. 
> 
> > AverageImages 3 out.nii.gz *.nii.gz
> >  Averaging 14 images 
> >  fn ap_antsT1.nii.gz
> >  fn el_antsT1.nii.gz
> >  fn hn_antsT1.nii.gz
> >  fn hv_antsT1.nii.gz
> >  fn jh_antsT1.nii.gz
> >  fn jml_antsT1.nii.gz
> >  fn jp_antsT1.nii.gz
> >  fn jv_antsT1.nii.gz
> >  fn mh_antsT1.nii.gz
> >  fn mk_antsT1.nii.gz
> >  fn pv_antsT1.nii.gz
> >  fn rk_antsT1.nii.gz
> >  fn sk_antsT1.nii.gz
> >  fn sr_antsT1.nii.gz
> >  largest image [0, 0, 0]
> >  file AverageImages does not exist . 
> > Segmentation fault
> 
> > Anyone experiencing similar problems? This on Debian Wheezy (AMD64).
> 
> > Greetings,
> 
> > Antti
> 
> 
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> 
>