[pymvpa] numpy dependecy issues on Mac OS X?

Yaroslav Halchenko debian at onerussian.com
Mon Apr 27 01:24:49 UTC 2009


FWIW

heh -- are you manually installing scipy/numpy tandem or using some
feeds/repository? that is their job to make sure that they use
appropriate versions of both modules.

in debian (sid) versions are 1.2.1 and 0.7.0

in lenny: 1.1.0 and 0.6.0

so I guess you would need to upgrade to some numpy which is compatible
with scipy 1.3 (if there is such), sorry for my ignorance on the history
of API changes in numpy/scipy to give you better answer

On Sun, 26 Apr 2009, James M. Hughes wrote:

> Hi all,
>
> I just upgraded to numpy 1.3 via macports (since apparently 1.1+ was  
> required for matplotlib).
>
> When I tried loading up pymvpa after doing so, I got an error (here's  
> just the end of it):
>
> /opt/local/lib/python2.5/site-packages/scipy/special/__init__.py in  
> <module>()
>      19 register_func('i0',i0)
>      20 del register_func
>      21
> ---> 22 from numpy.testing import NumpyTest
>      23 test = NumpyTest().test
>
> ImportError: cannot import name NumpyTest
>
>
> So it seems that NumpyTest doesn't exist in 1.3.
>
> Is this a known issue?  Are we meant to not upgrade to numpy 1.3 (on OS 
> X?)?
>
> Has anyone else encountered this?  Does numpy 1.1 work?
>
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-- 
Yaroslav Halchenko
Research Assistant, Psychology Department, Rutgers-Newark
Student  Ph.D. @ CS Dept. NJIT
Office: (973) 353-1412 | FWD: 82823 | Fax: (973) 353-1171
        101 Warren Str, Smith Hall, Rm 4-105, Newark NJ 07102
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