[pymvpa] numpy dependecy issues on Mac OS X?

Michael Hanke michael.hanke at gmail.com
Mon Apr 27 04:37:51 UTC 2009


On Sun, Apr 26, 2009 at 07:06:59PM -0400, James M. Hughes wrote:
> Hi all,
>
> I just upgraded to numpy 1.3 via macports (since apparently 1.1+ was  
> required for matplotlib).
>
> When I tried loading up pymvpa after doing so, I got an error (here's  
> just the end of it):
>
> /opt/local/lib/python2.5/site-packages/scipy/special/__init__.py in  
> <module>()
>      19 register_func('i0',i0)
>      20 del register_func
>      21
> ---> 22 from numpy.testing import NumpyTest
>      23 test = NumpyTest().test
>
> ImportError: cannot import name NumpyTest
>
>
> So it seems that NumpyTest doesn't exist in 1.3.
>
> Is this a known issue?  Are we meant to not upgrade to numpy 1.3 (on OS 
> X?)?

You can easily upgrade to NumPy 1.3 on MacOS -- however you also have to
upgrade SciPy at the same time. SciPy is tightly bound to the NumPy
development. It is hardly possible to update one without the other. This
fact is independent of the actual OS used.

Except for a few minor pieces PyMVPA is pretty much ignorant of the
NumPy/SciPy version.


Michael

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