[pymvpa] scipy problem at installation

Fabian Pedregosa fabian.pedregosa at inria.fr
Wed Feb 3 13:21:01 UTC 2010


> 
> But after installing scipy-0.7.1-win32-superpack-python2.5 I get:
> 
>>>> from mvpa.suite import *
> 
> Traceback (most recent call last):
>   File "<pyshell#0>", line 1, in <module>
>     from mvpa.suite import *
>   File "C:\Python25\Lib\site-packages\mvpa\suite.py", line 38, in <module>
>     from mvpa.algorithms.cvtranserror import *
>   File "C:\Python25\Lib\site-packages\mvpa\algorithms\cvtranserror.py",
> line 15, in <module>
>     from mvpa.measures.base import DatasetMeasure
>   File "C:\Python25\Lib\site-packages\mvpa\measures\base.py", line 31,
> in <module>
>     from mvpa.clfs.stats import autoNullDist
>   File "C:\Python25\Lib\site-packages\mvpa\clfs\stats.py", line 454, in <module>
>     from mvpa.support.stats import scipy
>   File "C:\Python25\Lib\site-packages\mvpa\support\stats.py", line 21,
> in <module>
>     import scipy.stats
>   File "C:\Python25\lib\site-packages\scipy\stats\__init__.py", line
> 7, in <module>
>     from stats import *
>   File "C:\Python25\lib\site-packages\scipy\stats\stats.py", line 203,
> in <module>
>     from morestats import find_repeats #is only reference to scipy.stats
>   File "C:\Python25\lib\site-packages\scipy\stats\morestats.py", line
> 7, in <module>
>     import distributions
>   File "C:\Python25\lib\site-packages\scipy\stats\distributions.py",
> line 27, in <module>
>     import vonmises_cython
>   File "numpy.pxd", line 30, in scipy.stats.vonmises_cython
> (scipy\stats\vonmises_cython.c:2939)
> ValueError: numpy.dtype does not appear to be the correct type object
> 
> 

I had some similar problems with cKDTree [1], and apparently it's due to
some version mismatch, although I don't know what versions you need to
make it work.


[1] http://projects.scipy.org/scipy/ticket/1106

> 
> 
> Is there an obvious solution to this? Any help very much appreciated.
> 
> Cheers,
> Patrik
> 
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