[pymvpa] Update on Searchlight/MVPA
Yaroslav Halchenko
debian at onerussian.com
Wed Feb 24 20:55:58 UTC 2010
sorry for slow replies... busy atm
> I fixed the bugs
what was the bug? ;)
> and ran searchlight on my fMRI data in pyMVPA
> (python2.6, mac os leopard), however when i attempt to create map2nifti
> file, it gives me the following error:
> In [31]: dataset.map2Nifti(s1_map).save('searchlight_5mm.nii.gz')
> ** ERROR (nifti_image_write_hdr_img2): cannot open output file
> 'searchlight_5mm.nii.gz'
> I am not sure why that is so.
are you sure that directory is writable?
type
pwd
to see current one, try to open some bogus file
f=open('searchlight_5mm.nii.gz', 'w'); f.close()
to see if no objections from filesystem ;)
--
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