[pymvpa] sensitivity analyzer for regression models?
Daniel Kimberg
kimberg at mail.med.upenn.edu
Mon Mar 15 14:05:46 UTC 2010
Hi. I wanted to get a sensitivity map for a regression problem, but I keep getting segfaults. I've reduced it to a simple case that's repeatable on my machines:
from mvpa.suite import *
import numpy as n
myds=Dataset(samples=n.random.normal(size=(10,5)),labels=N.random.normal(size=10))
cc=SVM(svm_impl='NU_SVR',kernel_type='linear',regression=True)
ss=cc.getSensitivityAnalyzer()
res=ss(myds)
Am I misunderstanding how this is supposed to work, or otherwise doing something wrong? (Segfaulting seems like bad behavior in any case.) If I change it to a classification problem, I do get sensible results. I'm using 0.4.4 on a 64-bit Fedora 12 system. I'd be happy to switch to the development version if it's reasonably stable. Thanks for any help,
dan
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