[pymvpa] pymvpa installation problem... nifti not found

[Michael Hanke]

Hey,

could you give us some details about this perceived slowness, please. So far
we found the performance quite comparable to a native installation. How much
memory and cpus did you assign to the virtual machine?

Michael
On Oct 29, 2010 6:27 PM, <tbeck at artsci.wustl.edu> wrote:
> Yaroslav
>
> Thanks much for your fast helpful feedback. the debian virtual machine
> works well. it runs a bit slow on my machine, but should work for the
> time being. Thanks again for the helpful feedback to a newbie.
>
> have a great weekend everybody,
> Taylor
>
>
>> On Fri, 29 Oct 2010, tbeck at artsci.wustl.edu wrote:
>>> python -c 'import nifti' gave me the same error:
>>> Import Error: No module named nifti
>>
>> so, there is no nifti for this version/flavor of python you are using by
>> default ;)
>>
>>> can you tell from this output what may have
>>> gone wrong?
>> I bet it is exactly what I feared:
>>
>> P.S. Common problem on OSX is the hell of mixes of different pythons
>> and corresponding modules installed via variety of methods (local,
>> macports, etc) since there is no uniform one "out of the box"
>> installation mechanism, i.e. like on Debian ;-) thus for the best
>> experience we just advice users to use
>> http://neuro.debian.net/vm.html.
>>
>>> When I ran print mvpa.wtf(), I noticed a bunch of the externals don't
>>> seem
>>> to have installed properly (see below). Is there a command to install
>>> these individually manually?
>>
>> get sources and follow each package installation instructions, which
>> most of the time something like
>>
>> python setup.py install
>>
>>
>> or once again -- forget about all this mess and use virtual machine with
>> Debian and enjoy the paradise ;-)
>>
>> --
>> .-.
>> =------------------------------ /v\ ----------------------------=
>> Keep in touch // \\ (yoh@|www.)onerussian.com
>> Yaroslav Halchenko /( )\ ICQ#: 60653192
>> Linux User ^^-^^ [175555]
>>
>>
>>
>> _______________________________________________
>> Pkg-ExpPsy-PyMVPA mailing list
>> Pkg-ExpPsy-PyMVPA at lists.alioth.debian.org
>> http://lists.alioth.debian.org/mailman/listinfo/pkg-exppsy-pymvpa
>>
>
>
>
> _______________________________________________
> Pkg-ExpPsy-PyMVPA mailing list
> Pkg-ExpPsy-PyMVPA at lists.alioth.debian.org
> http://lists.alioth.debian.org/mailman/listinfo/pkg-exppsy-pymvpa
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.alioth.debian.org/pipermail/pkg-exppsy-pymvpa/attachments/20101029/726cd3b2/attachment.htm>