[pymvpa] error py26-pywavelets installation on snow leopard Mac

[James Kyle]

Ok, here's a patch that fixes the first failed test aside from the lxml dep missing.

On line #253 of mvpa/misc/transformers.py there's a version test for numpy that evaluates to True and creates a **kwargs hash of {'new': False} for N.histogram(). The 'new' kwarg is no longer supported as of Numpy version >= 1.4. I modified the test to provide a **kwarg of {} for all versions < 1.4 resolving the test error.

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-james

On Jan 29, 2011, at 11:00 AM, James Kyle wrote:

> Ok, I rolled back to the 0.4 HEAD (maint/0.4).
> 
> This compiles without error, but running the unittests produces some errors. The output of the log was quite large (2.5M) so rather than attaching I uploaded it to our server.
> 
> The full log can be found here:
> 
> http://www.kspacemri.com/data/tests.log
> 
> 
> -james
> On Jan 28, 2011, at 5:43 PM, Yaroslav Halchenko wrote:
> 
>> 
>> On Fri, 28 Jan 2011, James Kyle wrote:
>>>> ah... I guess it is time to release 0.4.6 of pymvpa -- we have that
>>>> libsvm3.0 compatibility fix past 0.4.5 release:
>> 
>>> I've actually been toying with the 0.6.0.dev branch, is that not ready for the masses yet?
>> well... it has been used by users and we hope to release it soon (
>> probably as soon as our extensive testing battery shows no bad symptomps ;-) )
>> 
>> the problem is that it is not compatible, so it might come as a surprise
>> to macport users... for Debian users we ship python-mvpa-snapshot which
>> provides 0.6.x functionality before we release it
>> 
>> so altogether it would be better to stick with 0.4.x series until 0.6.0
>> gets released
>> 
>>>> or could macports simply build off a specific git branch? (i.e. maint/0.4)
>>> I can setup the macports build script for whichever branch is preferred/recommended.
>> 
>> So you would not need to tune it up later on, probably let it stay as
>> is -- HEAD of that repository corresponds to debian releases...  I
>> progressed it forward (merged maint/0.4)...
>> 
>> is port taking a HEAD or releases (tags), as given by
>>   livecheck.regex {upstream\/([0-9.]+)}
>> (and that is how it assigns the version according to (...) above)?
>> 
>> -- 
>> =------------------------------------------------------------------=
>> Keep in touch                                     www.onerussian.com
>> Yaroslav Halchenko                 www.ohloh.net/accounts/yarikoptic
>> 
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>