[pymvpa] help gnbsearchlight

Patrik Andersson halvguden at gmail.com
Thu Feb 10 19:45:29 UTC 2011


Hi,

I have installed your 0.6 dev version to try it out. Though I from time to
time get a bit perplex from the new parameter names etc, I have managed to
get fairly familiar with it.
I now wanted to, just for fun, try the GNB searchlight, but fail.

A short thing I tried was e.g.
from tutorial_lib import *

ds = get_haxby2001_data_alternative(roi='brain')

clf = GNB()
#gen = HalfPartitioner(attr='runtype')
gen = NFoldPartitioner()
gnbsl = sphere_gnbsearchlight(clf, gen)

res = gnbsl(ds)

What is wrong here? I guess the 'generator' is not whats expected(?)

K regards,
H
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