[pymvpa] An error in the very first step of the tutorial

Glen Lee glen.lee02 at gmail.com
Thu Mar 3 16:28:34 UTC 2011


Hello,
I'm a newbie for PyMVPA and just started going over the tutorial.
Unfortunately, I have no idea what the following errors are (see below) that
I received after run the very first command in the tutorial.
Particularly, it gave me Deparecation warning and complained that there is
no module Nibabel.
It'd be great if anybody explains those errors and how to fix.
-Glen



-----------------------------------------------------------------------------------------------------------



In [1]: from tutorial_lib import *
/usr/lib/pymodules/python2.6/mvpa/base/verbosity.py:19: DeprecationWarning:
the sets module is deprecated
  from sets import Set
/usr/lib/pymodules/python2.6/matplotlib/numerix/__init__.py:18:
DeprecationWarning:
**********************************************************
matplotlib.numerix and all its subpackages are deprecated.
They will be removed soon.  Please use numpy instead.
**********************************************************

  warnings.warn(msg, DeprecationWIn [1]: from tutorial_lib import *
/usr/lib/pymodules/python2.6/mvpa/base/verbosity.py:19: DeprecationWarning:
the sets module is deprecated
  from sets import Set
/usr/lib/pymodules/python2.6/matplotlib/numerix/__init__.py:18:
DeprecationWarning:
**********************************************************
matplotlib.numerix and all its subpackages are deprecated.
They will be removed soon.  Please use numpy instead.
**********************************************************

  warnings.warn(msg, DeprecationWarning)
---------------------------------------------------------------------------
ImportError                               Traceback (most recent call last)

/home/ysl/Downloads/tutorial_data/<ipython console> in <module>()

/home/ysl/Downloads/tutorial_data/tutorial_lib.py in <module>()
     14 # later replace with

     15 from mvpa.suite import *
---> 16 import nibabel as nb
     17
     18 tutorial_data_path = mvpa.cfg.get('location', 'tutorial data',
default=os.path.curdir)

ImportError: No module named nibabel
arning)
---------------------------------------------------------------------------
ImportError                               Traceback (most recent call last)

/home/ysl/Downloads/tutorial_data/<ipython console> in <module>()

/home/ysl/Downloads/tutorial_data/tutorial_lib.py in <module>()
     14 # later replace with

     15 from mvpa.suite import *
---> 16 import nibabel as nb
     17
     18 tutorial_data_path = mvpa.cfg.get('location', 'tutorial data',
default=os.path.curdir)

ImportError: No module named nibabel
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.alioth.debian.org/pipermail/pkg-exppsy-pymvpa/attachments/20110303/37b02719/attachment.htm>


More information about the Pkg-ExpPsy-PyMVPA mailing list