[pymvpa] Fwd: Data import with pynifti

Roberto Guidotti robbenson18 at gmail.com
Tue Mar 29 14:46:57 UTC 2011


So, I've tested my Images with the newest version.
My images are converted with BrainVoyager in Analyze format (.hdr/.img) not
Nifti, and I have the issue that the scl_slope, scl_inter, are stored wrong,
my first image has right value, the others have scl_slope = 0.0 and
scl_interp = 0.0.

Thank you
Roberto.

2011/3/9 Yaroslav Halchenko <debian at onerussian.com>

> simple questions are better than hard ones ;)
>
> and yes -- with 0.4.7 release scaling issue should have been resolved --
> all data, while read from NIfTI (your .img/.hdr are nifti ones, not
> analyze, right?) will be scaled appropriately upon loading from 1 or
> multiple volumes (unless you explicitly instruct it not to do so with
> 'scale_data=False')
>
> On Wed, 09 Mar 2011, Roberto Guidotti wrote:
>
> >    Well, you're right Yaroslav, only the first .img file has right
> >    scl_slope, scl_inter field setted.
> >    So, with your last release is this issue solved or I have to fill
> every
> >    field with correct value?
> >    Sorry for my simple question.
> --
> =------------------------------------------------------------------=
> Keep in touch                                     www.onerussian.com
> Yaroslav Halchenko                 www.ohloh.net/accounts/yarikoptic
>
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