[pymvpa] Trouble running pyMVPA on Mac OS 10.6.6

Thad Polk tpolk at umich.edu
Fri Oct 28 09:15:34 UTC 2011


The instructions on Jonas' web page worked great, thanks so much. I 
recommend at least providing a link to his page in the Mac installation 
instructions.

Thad


On Thu, 27 Oct 2011, Jonas Kaplan wrote:

> You beat me to it. :)
>
> I had put that together after finding the correct combination of sources that worked on OSX 10.6, but the installation still works after upgrading to 10.7, so this guide should hopefully still be useful.
>
> Just note that the links to the pymvpa source code itself are now out of date.
>
>
> ----
> Jonas Kaplan, Ph.D.
> Research Assistant Professor
> Brain & Creativity Institute
> University of Southern California
>
> On Oct 26, 2011, at 9:58 AM, Mike E. Klein wrote:
>
>> I'd recommend using this person's guide, which I found very helpful:
>>
>> http://www.jonaskaplan.com/lab/pymvpainstallation.php/
>>
>> On Wed, Oct 26, 2011 at 11:43 AM, Yaroslav Halchenko <debian at onerussian.com> wrote:
>> well -- then nibabel need to be installed one way or another... not sure
>> if ports have it (did you search for it?) so I would just refer you to
>> http://nipy.sourceforge.net/nibabel/installation.html#installation
>>
>> otherwise, once again, virtual machine would provide you ALL those and
>> more in a matter of a few minutes ;-)
>>
>> On Wed, 26 Oct 2011, Thad Polk wrote:
>>
>>
>>> On Wed, 26 Oct 2011, Yaroslav Halchenko wrote:
>>
>>>> 1. try installing/using it directly from sources: it should be as simple as
>>
>>>> git clone git://github.com/PyMVPA/PyMVPA.git
>>>> cd PyMVPA
>>>> make
>>>> export PYTHONPATH=$PWD
>>
>>>> and you should be all set
>>
>>> This did indeed solve my initial problem (thanks). But now it
>>> complains about nibabel:
>> --
>> =------------------------------------------------------------------=
>> Keep in touch                                     www.onerussian.com
>> Yaroslav Halchenko                 www.ohloh.net/accounts/yarikoptic
>>
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>
>



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