[pymvpa] every permutation returning the same value

Ben Acland benacland at gmail.com
Tue Sep 2 17:10:36 UTC 2014


Figured it out... you'll notice that the classifiers are using the default sample attribute, "targets," but I'm permuting "sub_group." Since I set "targets" to the same values as "sub_group," swapping out every reference to sub_group after that to 'targets' seems to have done the trick.

Ben

On Sep 1, 2014, at 3:31 AM, Nick Oosterhof <nikolaas.oosterhof at unitn.it> wrote:

> Hi Ben,
> 
> On 31 August 2014 22:09, Ben Acland <benacland at gmail.com> wrote:
> Hmm, I'm trying to follow the same pattern as the tuturial at http://www.pymvpa.org/tutorial_significance.html:
> 
> >>> distr_est = MCNullDist(repeater, tail='left',
> ...                        measure=null_cv,
> ...                        enable_ca=['dist_samples'])
> 
> Can you give me a hint as to what I'd need to change?
> 
> I'm not really sure, but would be happy to take a look.
> Could you provide a runnable script (using data either from dataset_wizard or the tutorial data) so I can try and replicate the issue?
> 
> best,
> Nick
> 
> _______________________________________________
> Pkg-ExpPsy-PyMVPA mailing list
> Pkg-ExpPsy-PyMVPA at lists.alioth.debian.org
> http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/pkg-exppsy-pymvpa

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.alioth.debian.org/pipermail/pkg-exppsy-pymvpa/attachments/20140902/63e3f22f/attachment.html>


More information about the Pkg-ExpPsy-PyMVPA mailing list