[pymvpa] LinearCSVMC not found in PyMVPA-upstream-2.4.0 release (Nick Oosterhof)

Nick Oosterhof n.n.oosterhof at googlemail.com
Thu Jul 23 08:41:00 UTC 2015


Hi Feilong,

> On 22 Jul 2015, at 20:45, Feilong Ma <mafeilong at gmail.com> wrote:
> 
> Switching to an earlier version of SWIG works for me.  I had problems with SWIG 3.0.5, but when I switched to SWIG 3.0.4 the problem was solved.  I installed SWIG using Homebrew, which should work in the same way as installing from source.

Thanks a lot for trying this out, confirming that the SWIG version seems to be the issue, and narrowing down when the change in SWIG was introduced that breaks compiling the SVM functionality in PyMVPA.

> The error message I talked about with CLANG still appears while running `python setup.py build_ext`.  I guess it's not related to this issue.  The message is:
> #### ['clang', '-fno-strict-aliasing', '-fno-common', '-dynamic', '-g', '-O2', '-DNDEBUG', '-g', '-fwrapv', '-O3', '-Wall', '-Wstrict-prototypes'] #######
> Missing compiler_cxx fix for UnixCCompiler

I forgot to mention this in my earlier post, but I got the same error message. 

So for SWIG, I wonder if this is a mac-related issue, or also applies to Linux installations. I may try and find some time to try this out.

best,
Nick


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