[pymvpa] Confusion Matrix for each Node with sphere_gnbsearchlight

Yaroslav Halchenko debian at onerussian.com
Fri Aug 28 16:15:09 UTC 2015


On Fri, 28 Aug 2015, marco tettamanti wrote:

>    Dear Yaroslav,
>    thank you very much for your reply. I have made several attempts, trying
>    to guess a solution, but it seems I always get a
>    'TypeError: 'NoneType' object is not callable'.

oh shoot... forgotten that this one was implemented after the last 2.4.0
release: in upstream/2.4.0-34-g55e147e this June... we should release I
guess. what system are you on and what version of pymvpa currently?
if you could use/try the one from git directly... ?

>    Case 1:
>    slght = sphere_gnbsearchlight(clf, partitioner, radius=slradius,
>    space='voxel_indices', errorfx=None, postproc=mean_sample())

not the problem here BUT there should  be no mean_sample() if errorfx is
None -- you wouldn't want to average labels ;)

-- 
Yaroslav O. Halchenko, Ph.D.
http://neuro.debian.net http://www.pymvpa.org http://www.fail2ban.org
Research Scientist,            Psychological and Brain Sciences Dept.
Dartmouth College, 419 Moore Hall, Hinman Box 6207, Hanover, NH 03755
Phone: +1 (603) 646-9834                       Fax: +1 (603) 646-1419
WWW:   http://www.linkedin.com/in/yarik        



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