[pymvpa] GroupClusterThreshold memory usage

Bill Broderick billbrod at gmail.com
Thu Sep 3 16:04:54 UTC 2015


Hi all,

I'm trying to run group cluster thresholding using the defaults of
GroupClusterThreshold (100000 bootstraps) and I'm running into memory
issues. In the documentation, it looks like either n_proc (to split
the load across several nodes on our cluster) or n_blocks would help,
but it's not clear to me how to use these parameters. Can someone give
me a brief example?

Thanks,
Bill



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