[pymvpa] Running Searchlight on ETH cluster

[Nick Oosterhof]

On 28 October 2017 at 11:36, Pegah Kassraian Fard <pegahkf at gmail.com> wrote:

> Dear pymvpa developers,
>
> As you know running a whole brain searchlight can be quite time-consuming.
> So we are currently trying to run it on a cluster of our university (ETH
> Zurich). However, IT support is having trouble installing mvpa and
> corresponding modules. Apparently, they get the following error message:
>
> /cluster/apps/gcc/4.8.2/bin/gcc -pthread -shared
> build/temp.linux-x86_64-3.6/mvpa2/clfs/libsmlrc/smlr.o
> -L/cluster/apps/python/3.6.0/x86_64/lib64 -lm -lpython3.6m *-o
> build/lib.linux-x86_64-3.6/mvpa2/clfs/libsmlrc/smlrc.cpython-36m-x86_64-linux-gnu.so
> <http://smlrc.cpython-36m-x86_64-linux-gnu.so>*
>  -L/cluster/apps/libsvm/3.2.2/x86_64 -lsvm
> /usr/bin/ld: cannot find -lsvm
>
>
>
This may indicate that it cannot find the libsvm library.

Has IT support followed the "building from source" instructions at
http://v04.pymvpa.org/installation.html#building-from-source ?
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