[med-svn] [Git][med-team/community/helper-scripts][master] automatic update
Andreas Tille
gitlab at salsa.debian.org
Wed Mar 4 01:45:12 GMT 2020
Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
7fd3f8b2 by Andreas Tille at 2020-03-04T01:45:09+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Tue, 03 Mar 2020 13:42:03 +0000
+Last-Update: Wed, 04 Mar 2020 01:42:03 +0000
Source | Vote | Tasks | Tags
-------------------------------+--------+--------------------------------------------+----------------------------------------------------------------------
=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Tue, 03 Mar 2020 13:42:04 +0000
+Last-Update: Wed, 04 Mar 2020 01:42:03 +0000
source | version | upstream_version | uploaders | Last uploader | Last uploaded
-------------------------------+---------------------------------+---------------------------------+-----------------------------------------------------------------------------+----------------------+------------------------
@@ -24,7 +24,6 @@ Last-Update: Tue, 03 Mar 2020 13:42:04 +0000
fis-gtm | 6.3-007 | 6.3-010 | Amul Shah,Andreas Tille | Amul Shah | 2019-02-28 14:12:19+00
gatb-core | 1.4.1+git20191209.9398f28 | 1.4.1+git20200118.1dc23ff | Andreas Tille,Nadiya Sitdykova | Michael R. Crusoe | 2020-02-17 14:52:30+00
gdcm | 3.0.4 | 3.0.5 | Gert Wollny,Sébastien Jodogne,Steve M. Robbins | Gert Wollny | 2019-11-07 11:49:02+00
- gnumed-server | 22.9 | 22.11 | Andreas Tille,Sebastian Hilbert | Andreas Tille | 2020-02-27 11:19:44+00
hdmf | 1.5.4 | 1.6.0 | Yaroslav Halchenko | Yaroslav Halchenko | 2020-02-03 03:01:25+00
htsjdk | 2.18.2 | 2.21.2 | Andreas Tille,Charles Plessy,Olivier Sallou,Vincent Danjean | Andreas Tille | 2019-03-01 22:19:40+00
hyphy | 2.5.1 | 2.5.4 | Andreas Tille | Andreas Tille | 2020-01-07 21:19:50+00
@@ -51,7 +50,6 @@ Last-Update: Tue, 03 Mar 2020 13:42:04 +0000
ncbi-blast+ | 2.9.0 | 2.10.0 | Aaron M. Ucko,Andreas Tille,Olivier Sallou | Aaron M. Ucko | 2020-02-17 01:50:53+00
ncbi-vdb | 2.10.3 | 2.10.4 | Andreas Tille | Andreas Tille | 2020-02-24 21:12:17+00
ngs-sdk | 2.10.2 | 2.10.4 | Andreas Tille,Olivier Sallou,Vincent Danjean | Michael R. Crusoe | 2020-02-17 15:36:45+00
- nibabel | 2.5.1 | 3.0.1 | Michael Hanke,Yaroslav Halchenko | Andreas Tille | 2020-01-20 10:35:09+00
pbcopper | 1.3.0 | 1.4.0 | Andreas Tille | Andreas Tille | 2020-01-29 08:51:15+00
pbgenomicconsensus | 2.3.2 | 2.3.3 | Andreas Tille | Liubov Chuprikova | 2019-04-07 15:33:36+00
pbseqlib | 5.3.3 | 5.3.4 | Andreas Tille | Andreas Tille | 2020-01-29 15:04:33+00
@@ -92,7 +90,7 @@ Last-Update: Tue, 03 Mar 2020 13:42:04 +0000
unanimity | 3.3.0 | 4.2.0 | Afif Elghraoui,Andreas Tille | Adrian Bunk | 2019-02-06 07:34:42+00
vsearch | 2.14.1 | 2.14.2 | Andreas Tille,Tim Booth | Andreas Tille | 2019-12-17 10:07:09+00
xmedcon | 0.16.1 | 0.16.2 | Andreas Tille,Roland Marcus Rutschmann | Andreas Tille | 2019-01-25 18:23:59+00
-(90 rows)
+(88 rows)
source | id | severity | title
@@ -162,8 +160,6 @@ Last-Update: Tue, 03 Mar 2020 13:42:04 +0000
gemma | 952190 | serious | gemma: FTBFS: dh_auto_test: error: make -j1 check returned exit code 2
gentle | 732691 | normal | Pressing "alignment or Ctrl+G" only results in a dialog with a cancel button
ghmm | 936609 | normal | ghmm: Python2 removal in sid/bullseye
- gnumed-client | 936630 | serious | gnumed-client: Python2 removal in sid/bullseye
- gnumed-client | 952633 | wishlist | gnumed-client: hints for py3 packaging
harvest-tools | 943055 | normal | harvest-tools: Python2 removal in sid/bullseye
hinge | 952615 | serious | hinge: FTBFS: fmt.h:22:10: fatal error: spdlog/fmt/bundled/core.h: No such file or directory
htsjdk | 877590 | normal | FTBFS: error: package org.testng does not exist
@@ -185,7 +181,6 @@ Last-Update: Tue, 03 Mar 2020 13:42:04 +0000
kineticstools | 936797 | serious | kineticstools: Python2 removal in sid/bullseye
kissplice | 936798 | normal | kissplice: Python2 removal in sid/bullseye
kmer | 936802 | normal | kmer: Python2 removal in sid/bullseye
- libbio-alignio-stockholm-perl | 952747 | serious | libbio-alignio-stockholm-perl: missing Breaks+Replaces: libbio-perl-perl (<< 1.7.3)
libgtextutils | 925745 | serious | libgtextutils: ftbfs with GCC-9
libhmsbeagle | 950367 | normal | confuses DEB_HOST_MULTIARCH and DEB_HOST_GNU_TYPE
libjung-free-java | 884379 | minor | libjung-free-java: New version available
@@ -257,7 +252,7 @@ Last-Update: Tue, 03 Mar 2020 13:42:04 +0000
q2-types | 950932 | normal | q2-types: FTBFS with pandas 1.0: test failures
qcumber | 883260 | wishlist | qcumber: [INLT:ru] Russian translation of debconf template
qcumber | 913936 | wishlist | qcumber: [INTL:pt_BR] Brazilian Portuguese debconf templates translation
- qiime | 950842 | important | autopkg tests fail with Python 3.8
+ qiime | 950842 | serious | autopkg tests fail with Python 3.8
qrisk2 | 912118 | normal | qrisk2: 2017 upstream release
qrisk2 | 912119 | normal | qrisk2: please provide qrisk3
rapmap | 909766 | important | Use Debian packaged spdlog instead of code copy of old version
@@ -265,8 +260,6 @@ Last-Update: Tue, 03 Mar 2020 13:42:04 +0000
salmon | 952102 | serious | salmon: FTBFS: SalmonAlevin.cpp:780:6: error: ‘class rapmap::utils::MappingConfig’ has no member named ‘maxSlack’
sambamba | 938431 | normal | sambamba: Python2 removal in sid/bullseye
sambamba | 948919 | serious | sambamba FTBFS: undefined reference to 'cram_to_bam'
- seqan | 943260 | normal | seqan: Python2 removal in sid/bullseye
- seqan | 952203 | serious | seqan: FTBFS: dh_auto_test: error: cd obj-x86_64-linux-gnu && make -j4 test ARGS\+=-j4 returned exit code 2
seqan2 | 892222 | normal | seqan2: FTBFS on hppa: app_test_seqan_tcoffee fails on 2trx.mlcs.fasta
seqan2 | 917851 | important | seqan2 2.4.0+dfsg-9: FTBFS, alignment problem
simpleitk | 949355 | serious | simpleitk FTBFS: test failures
@@ -292,5 +285,5 @@ Last-Update: Tue, 03 Mar 2020 13:42:04 +0000
xmedcon | 671828 | normal | xmedcon: Cannot open file with YBR photometric interpretation
xmedcon | 779707 | normal | Errors when reading dicomdir file: "No images found" / "Loading: DICM Error reading file"
xmedcon | 924017 | normal | desktop entry
-(195 rows)
+(190 rows)
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7fd3f8b2f2f7beefb8efb945920f1d1c0d7738be
--
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/7fd3f8b2f2f7beefb8efb945920f1d1c0d7738be
You're receiving this email because of your account on salsa.debian.org.
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://alioth-lists.debian.net/pipermail/debian-med-commit/attachments/20200304/202e1181/attachment-0001.html>
More information about the debian-med-commit
mailing list