[med-svn] [Git][med-team/community/helper-scripts][master] automatic update

[Andreas Tille]

Andreas Tille pushed to branch master at Debian Med / community / helper-scripts


Commits:
cf976ab6 by Andreas Tille at 2020-03-27T01:45:02+00:00
automatic update

- - - - -


2 changed files:

- debian-med-tests.txt
- outdated_med-packages.txt


Changes:

=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 26 Mar 2020 13:42:04 +0000
+Last-Update: Fri, 27 Mar 2020 01:42:03 +0000
 
  Source                        | Vote   |     Tasks                                           |                                 Tags                                 
 -------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------


=====================================
outdated_med-packages.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Thu, 26 Mar 2020 13:42:04 +0000
+Last-Update: Fri, 27 Mar 2020 01:42:03 +0000
 
  source                        |             version             |        upstream_version         |                       uploaders                                             | Last uploader        |     Last uploaded      
 -------------------------------+---------------------------------+---------------------------------+-----------------------------------------------------------------------------+----------------------+------------------------
@@ -131,6 +131,7 @@ Last-Update: Thu, 26 Mar 2020 13:42:04 +0000
  gemma                         | 952190 | serious   | gemma: FTBFS: dh_auto_test: error: make -j1 check returned exit code 2
  gentle                        | 732691 | normal    | Pressing "alignment or Ctrl+G"   only results in a dialog with a  cancel button
  ghmm                          | 936609 | normal    | ghmm: Python2 removal in sid/bullseye
+ gubbins                       | 955006 | serious   | src:gubbins: fails to migrate to testing for too long: ftbfs on i386
  harvest-tools                 | 943055 | normal    | harvest-tools: Python2 removal in sid/bullseye
  htsjdk                        | 877590 | normal    | FTBFS: error: package org.testng does not exist
  htsjdk                        | 920588 | normal    | htsjdk: Autopkgtest for htsjdk
@@ -176,6 +177,8 @@ Last-Update: Thu, 26 Mar 2020 13:42:04 +0000
  mypy                          | 952757 | minor     | mypy(1): build errors in man page
  ncbi-blast+                   | 891197 | normal    | Please switch to pcre2
  ncbi-tools6                   | 225651 | wishlist  | ncbi-tools-x11: want Cn3D++
+ ncbi-vdb                      | 952627 | serious   | libncbi-vdb2 uses undefined symbols
+ ncbi-vdb                      | 953897 | serious   | libncbi-vdb2 uses undefined symbols
  nibabel                       | 868229 | normal    | NotImplementedError: Pixel Data is compressed in a format pydicom does not yet handle. Cannot return array
  nut-nutrition                 | 339838 | wishlist  | nut-nutrition: Would like to record 'snacks' and change the number of meals
  obitools                      | 935340 | normal    | obitools: Port to Python3 needed
@@ -240,11 +243,9 @@ Last-Update: Thu, 26 Mar 2020 13:42:04 +0000
  sambamba                      | 948919 | serious   | sambamba FTBFS: undefined reference to 'cram_to_bam'
  seqan2                        | 892222 | normal    | seqan2: FTBFS on hppa: app_test_seqan_tcoffee fails on 2trx.mlcs.fasta
  seqan2                        | 917851 | important | seqan2 2.4.0+dfsg-9: FTBFS, alignment problem
- seqan3                        | 954589 | serious   | seqan3: FTBFS: two_dimensional_matrix_test.cpp:43:15: error: invalid type ‘__vector(1) int’ as initializer for a vector of type ‘const __vector(1) int’
  sight                         | 954711 | wishlist  | FTBFS with Boost 1.71
  simka                         | 954273 | important | simka: arm64 autopkgtest time out
  simpleitk                     | 949355 | serious   | simpleitk FTBFS: test failures
- skesa                         | 952627 | serious   | skesa: FTBFS: ld: /usr/lib/gcc/x86_64-linux-gnu/9/../../../x86_64-linux-gnu/libncbi-vdb.so: undefined reference to `vdb_mbedtls_entropy_init'
  snakemake                     | 943956 | wishlist  | snakemake: please make the build reproducible
  snap                          | 927011 | minor     | snap: Package info contains a 404 url
  snap-aligner                  | 848589 | normal    | snap-aligner: Build requires 188 GB of memory (fortunately not used, just allocated)
@@ -269,5 +270,5 @@ Last-Update: Thu, 26 Mar 2020 13:42:04 +0000
  xmedcon                       | 671828 | normal    | xmedcon: Cannot open file with YBR photometric interpretation
  xmedcon                       | 779707 | normal    | Errors when reading dicomdir file: "No images found" / "Loading: DICM Error reading file"
  xmedcon                       | 924017 | normal    | desktop entry
-(204 rows)
+(205 rows)
 



View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/cf976ab6233bafbb2fcbca6c4ef6c30a29e8f16b

-- 
View it on GitLab: https://salsa.debian.org/med-team/community/helper-scripts/-/commit/cf976ab6233bafbb2fcbca6c4ef6c30a29e8f16b
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