[pymvpa] custom cross-validation procedure: train on individual blocks, test on averaged blocks?
e c
ilangobi at yahoo.com
Wed Mar 7 21:47:17 UTC 2012
after the warning message,
the output of dataset.summary() is:
"Dataset: 54x130 at float64, <sa: blocks,censor,TR,chunks,TR2,targets>, <a: mapper>\nstats: mean=0.0785296 std=0.720478 var=0.519089 min=-2.79133 max=3.00064\n\nCounts of targets in each chunk:\n chunks\\targets HI HO\n --- ---\n 0.0 3 2\n 1.0 3 3\n 2.0 3 3\n 3.0 3 3\n 4.0 2 3\n 5.0 3 2\n 6.0 3 3\n 7.0 3 2\n 8.0 3 3\n 9.0 2 2\n\nSummary for targets across chunks\n targets mean std min max #chunks\n HI 2.8 0.4 2 3 10\n HO 2.6 0.49 2 3 10\n\nSummary for chunks across targets\n chunks mean std min max #targets\n 0 2.5 0.5 2 3 2\n
1 3 0 3 3 2\n 2 3 0 3 3 2\n 3 3 0 3 3 2\n 4 2.5 0.5 2 3 2\n 5 2.5 0.5 2 3 2\n 6 3 0 3 3 2\n 7 2.5 0.5 2 3 2\n 8 3 0 3 3 2\n 9 2 0 2 2 2\nSequence statistics for 54 entries from set ['HI', 'HO']\nCounter-balance table for orders up to 2:\nTargets/Order O1 | O2 |\n HI: 14 14 | 13 15 |\n HO: 14 11 | 15 9 |\nCorrelations: min=-0.26 max=0.18 mean=-0.019 sum(abs)=6.6"
here's another instance (different targets):
"Dataset: 57x130 at float64, <sa: blocks,censor,TR,chunks,TR2,targets>, <a: mapper>\nstats: mean=0.00158443 std=0.707033 var=0.499896 min=-3.96051 max=2.82313\n\nCounts of targets in each chunk:\n chunks\\targets VI VO\n --- ---\n 0.0 3 3\n 1.0 2 2\n 2.0 3 3\n 3.0 3 3\n 4.0 3 2\n 5.0 3 3\n 6.0 3 3\n 7.0 3 3\n 8.0 3 3\n 9.0 3 3\n\nSummary for targets across chunks\n targets mean std min max #chunks\n VI 2.9 0.3 2 3 10\n VO 2.8 0.4 2 3 10\n\nSummary for chunks across targets\n chunks mean std min max #targets\n 0 3 0 3 3 2\n
1 2 0 2 2 2\n 2 3 0 3 3 2\n 3 3 0 3 3 2\n 4 2.5 0.5 2 3 2\n 5 3 0 3 3 2\n 6 3 0 3 3 2\n 7 3 0 3 3 2\n 8 3 0 3 3 2\n 9 3 0 3 3 2\nSequence statistics for 57 entries from set ['VI', 'VO']\nCounter-balance table for orders up to 2:\nTargets/Order O1 | O2 |\n VI: 12 17 | 12 16 |\n VO: 17 10 | 17 10 |\nCorrelations: min=-0.26 max=0.37 mean=-0.018 sum(abs)=7"
thanks!
-edmund
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.alioth.debian.org/pipermail/pkg-exppsy-pymvpa/attachments/20120308/9d4d6fcd/attachment-0001.html>
More information about the Pkg-ExpPsy-PyMVPA
mailing list